RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 HRASLS2Q9NWW9 162 aa21.48■■□□□ 1.03
MCF2L2-209ENST00000475664 UTP6Q9NYH9 597 aaKnown RBP21.48■■□□□ 1.03
MCF2L2-209ENST00000475664 EPHA6Q9UF33 1036 aa21.48■■□□□ 1.03
MCF2L2-209ENST00000475664 LNPEPQ9UIQ6 1025 aa21.48■■□□□ 1.03
MCF2L2-209ENST00000475664 KERAO60938 352 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 CHRM5P08912 532 aaPredicted RBP21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 POLR2CP19387 275 aaPredicted RBP21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 IMPA1P29218 277 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 HSD17B2P37059 387 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 KCNC1P48547 511 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 PPM1FP49593 454 aaPredicted RBP21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 PNLIPRP1P54315 467 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 CDKL1Q00532 357 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 TECRLQ5HYJ1 363 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 CDCP2Q5VXM1 449 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 KLC3Q6P597 504 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 FRA10AC1Q70Z53 315 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 LCA5Q86VQ0 697 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 GPSM1Q86YR5 675 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 RHEBL1Q8TAI7 183 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 STAG3L4Q8TBR4 150 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 NCSTNQ92542 709 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 ATOH8Q96SQ7 321 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 ARL15Q9NXU5 204 aa21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 STOX2Q9P2F5 926 aaPredicted RBP21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 MN1Q10571 1320 aaPredicted RBP21.47■■□□□ 1.03
MCF2L2-209ENST00000475664 PABPN1LA6NDY0 278 aaKnown RBP21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 RGS16O15492 202 aaPredicted RBP21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 C9P02748 559 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 HOXB3P14651 431 aaPredicted RBP21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 KCNA4P22459 653 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 PEBP1P30086 187 aaKnown RBP21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 GFERP55789 205 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 PPP1CAP62136 330 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 SLC18A2Q05940 514 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 FASTKQ14296 549 aaKnown RBP21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 TGFBIQ15582 683 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 HDXQ7Z353 690 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 ADAMTS14Q8WXS8 1223 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 ZBTB9Q96C00 473 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 TSNARE1Q96NA8 513 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 DPYSL5Q9BPU6 564 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 SPHK1Q9NYA1 384 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 TMEM9Q9P0T7 183 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 RNF112Q9ULX5 631 aa21.46■■□□□ 1.03
MCF2L2-209ENST00000475664 PIPSLA2A3N6 862 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 MATN2O00339 956 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 CAPN5O15484 640 aaPredicted RBP21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 SNRNP200O75643 2136 aaKnown RBP21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 GUCA1CO95843 209 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 GSTA1P08263 222 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 KRT4P19013 534 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 ID4P47928 161 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 CLDN6P56747 220 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 PRKAA1Q13131 559 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 TNFAIP8L3Q5GJ75 292 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 ARMC6Q6NXE6 501 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 TMEM71Q6P5X7 295 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 ZNF574Q6ZN55 896 aaPredicted RBP21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 RBM44Q6ZP01 1051 aaKnown RBP21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 PLXDC1Q8IUK5 500 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 LRRC56Q8IYG6 542 aaPredicted RBP21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 C2orf73Q8N5S3 287 aaPredicted RBP21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 OR4D9Q8NGE8 314 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 FLVCR1-AS1Q8TAF5 88 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 FBXL8Q96CD0 374 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 PGM2Q96G03 612 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 ZMYND15Q9H091 742 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 ACTR10Q9NZ32 417 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 PDP2Q9P2J9 529 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 POMT2Q9UKY4 750 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 ENTPD2Q9Y5L3 495 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 PTPRBP23467 1997 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 PCM1Q15154 2024 aa21.45■■□□□ 1.02
MCF2L2-209ENST00000475664 A0A1W2PPV9 198 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 GSAPA4D1B5 854 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 ZNF839A8K0R7 811 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 C2orf74A8MZ97 194 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 E7ENX8 843 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 PRICKLE3O43900 615 aaPredicted RBP21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 ANXA5P08758 320 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 RBP1P09455 135 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 KPNA2P52292 529 aaKnown RBP21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 PDX1P52945 283 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 TAP2Q03519 686 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 KIR2DS3Q14952 304 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 ZXDCQ2QGD7 858 aaPredicted RBP21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 CDKL4Q5MAI5 379 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 HES3Q5TGS1 186 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 IRGCQ6NXR0 463 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 AGTRAPQ6RW13 159 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 TAX1BP1Q86VP1 789 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 SLITRK4Q8IW52 837 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 SRRM1Q8IYB3 904 aaKnown RBP21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 SYTL1Q8IYJ3 562 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 C4orf33Q8N1A6 199 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 PDPRQ8NCN5 879 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 PPFIBP2Q8ND30 876 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 SMPDL3AQ92484 453 aa21.44■■□□□ 1.02
MCF2L2-209ENST00000475664 EXT2Q93063 718 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms