RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 PAX1P15863 534 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 PDGFRAP16234 1089 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 HOXB6P17509 224 aaKnown RBP3.79□□□□□ -1.8
SDHB-204ENST00000475049 SP100P23497 879 aaPredicted RBP3.79□□□□□ -1.8
SDHB-204ENST00000475049 CAPZA1P52907 286 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 LIMK1P53667 647 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 ZNF415Q09FC8 603 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.8
SDHB-204ENST00000475049 ZNF273Q14593 569 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 ODF4Q2M2E3 257 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 PET117Q6UWS5 81 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 CEACAM20Q6UY09 585 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 C11orf57Q6ZUT1 292 aaPredicted RBP3.79□□□□□ -1.8
SDHB-204ENST00000475049 GALNTL5Q7Z4T8 443 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 ISCA2Q86U28 154 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 METTL23Q86XA0 190 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 OR11H4Q8NGC9 324 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 GRHL3Q8TE85 626 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 RMDN2Q96LZ7 410 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 MUS81Q96NY9 551 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 MGME1Q9BQP7 344 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 KATNB1Q9BVA0 655 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 CDH20Q9HBT6 801 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 XAB2Q9HCS7 855 aaKnown RBP3.79□□□□□ -1.8
SDHB-204ENST00000475049 SH3GLB2Q9NR46 395 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 SPHK1Q9NYA1 384 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 POLLQ9UGP5 575 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 ACAD8Q9UKU7 415 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 LRP12Q9Y561 859 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 RIPK3Q9Y572 518 aa3.79□□□□□ -1.8
SDHB-204ENST00000475049 A0A0G2JLW4 131 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 LOC101059948A0A1B0GTJ6 334 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 A0A1W2PRQ8 180 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 PTGESO14684 152 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 TSHBP01222 138 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 HSP90AB1P08238 724 aaKnown RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 IGHV4-38-2P0DP08 117 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 SAGP10523 405 aaPredicted RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 MYL6BP14649 208 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 LIFP15018 202 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 DCTP40126 519 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 GP5P40197 560 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 PRKCIP41743 596 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 LINC01547P58512 204 aaPredicted RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 MAT1AQ00266 395 aaKnown RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 CA9Q16790 459 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 UGP2Q16851 508 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 ITPRIPL2Q3MIP1 535 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 ZC2HC1CQ53FD0 456 aaPredicted RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 SLC35E4Q6ICL7 350 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 CAVIN1Q6NZI2 390 aaKnown RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 SUSD1Q6UWL2 747 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 RBMS3Q6XE24 437 aaKnown RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 SPATA21Q7Z572 469 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 DNAJB7Q7Z6W7 309 aaPredicted RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 TRPT1Q86TN4 253 aaKnown RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 NUDT13Q86X67 352 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 DCUN1D3Q8IWE4 304 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 LGI2Q8N0V4 545 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 EID3Q8N140 333 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 RYBPQ8N488 228 aaPredicted RBP3.78□□□□□ -1.8
SDHB-204ENST00000475049 ZNF383Q8NA42 475 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 CNBD1Q8NA66 436 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 KLHDC9Q8NEP7 349 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 KBTBD8Q8NFY9 601 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 RAD9AQ99638 391 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 KRTAP1-5Q9BYS1 174 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 LAT2Q9GZY6 243 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 FZD8Q9H461 694 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 GRPEL1Q9HAV7 217 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 MRGBPQ9NV56 204 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 WDR62O43379 1518 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 MRC2Q9UBG0 1479 aa3.78□□□□□ -1.8
SDHB-204ENST00000475049 IGLV9-49A0A0B4J1Y8 123 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 TRAV34A0A0B4J273 112 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 A0A1W2PN81 502 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 ANXA2P2A6NMY6 339 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 WDR46O15213 610 aaKnown RBP3.77□□□□□ -1.81
SDHB-204ENST00000475049 IRF2P14316 349 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 CDH3P22223 829 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 CA4P22748 312 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 TCEA1P23193 301 aaKnown RBP3.77□□□□□ -1.81
SDHB-204ENST00000475049 CDC25CP30307 473 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 PTGER4P35408 488 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 CHRNA7P36544 502 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 RPL21P46778 160 aaKnown RBP3.77□□□□□ -1.81
SDHB-204ENST00000475049 BMXP51813 675 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 UBASH3AP57075 661 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 TRAT1Q6PIZ9 186 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 MOXD1Q6UVY6 613 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 ENPP7Q6UWV6 458 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 KRT77Q7Z794 578 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 RTN4RL2Q86UN3 420 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 ANKRD13CQ8N6S4 541 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 OR10V1Q8NGI7 309 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 VANGL1Q8TAA9 524 aaPredicted RBP3.77□□□□□ -1.81
SDHB-204ENST00000475049 KCNE4Q8WWG9 221 aa3.77□□□□□ -1.81
SDHB-204ENST00000475049 FCAMRQ8WWV6 532 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms