RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FNDC3BQ53EP0 1204 aaKnown RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 LRIF1Q5T3J3 769 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ZNF648Q5T619 568 aaPredicted RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 CACHD1Q5VU97 1274 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 UGT2A3Q6UWM9 527 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 VITQ6UXI7 678 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 MSANTD1Q6ZTZ1 278 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ERN2Q76MJ5 926 aaKnown RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 LIX1Q8N485 282 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 PACRGLQ8N7B6 248 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 BEND7Q8N7W2 519 aaPredicted RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 OR52E4Q8NGH9 312 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 SLC13A3Q8WWT9 602 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 SELENOMQ8WWX9 145 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 RAB7BQ96AH8 199 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 TMEM159Q96B96 161 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 TESCQ96BS2 214 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 MIEF2Q96C03 454 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 NUS1Q96E22 293 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ZFYVE19Q96K21 471 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 CCDC115Q96NT0 180 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ZBTB18Q99592 522 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 KCTD14Q9BQ13 255 aaPredicted RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 HDAC8Q9BY41 377 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 DPY30Q9C005 99 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ZCCHC2Q9C0B9 1178 aaKnown RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 MCOLN1Q9GZU1 580 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 CXorf56Q9H5V9 222 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 GPRC5BQ9NZH0 403 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 SLAMF8Q9P0V8 285 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 STOX2Q9P2F5 926 aaPredicted RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 PDP2Q9P2J9 529 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 THAP10Q9P2Z0 257 aaPredicted RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 SCOCQ9UIL1 159 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 MAGEL2Q9UJ55 1249 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 HCN2Q9UL51 889 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 SLC22A14Q9Y267 594 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 AP3M1Q9Y2T2 418 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 PCDHB3Q9Y5E6 796 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 DOCK8Q8NF50 2099 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 KANSL1LA0AUZ9 987 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 DPPA5A6NC42 116 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 C1QTNF3-AMACRE9PGA6 284 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 H0YIV9 168 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 PRMT3O60678 531 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 SEC22BO75396 215 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 KCNH1O95259 989 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 LINGO3P0C6S8 592 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 HLA-EP13747 358 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 HSD3B1P14060 373 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 AMD1P17707 334 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 SDC1P18827 310 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 CD22P20273 847 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 HSD3B2P26439 372 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 MAPK1P28482 360 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 IMPA1P29218 277 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 HNF4AP41235 474 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 IL12RB1P42701 662 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 DGKQP52824 942 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 PNLIPRP1P54315 467 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 PLOD1Q02809 727 aaPredicted RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 RUNX3Q13761 415 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 SELPLGQ14242 412 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 AGERQ15109 404 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 PDK3Q15120 406 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 CPSF6Q16630 551 aaKnown RBP eCLIP9.54□□□□□ -0.88
USP39-214ENST00000474572 AAK1Q2M2I8 961 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 AASDHQ4L235 1098 aaPredicted RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 SYTL3Q4VX76 610 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 MTX3Q5HYI7 312 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 SPANXN4Q5MJ08 99 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 INTS11Q5TA45 600 aaKnown RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 FRG2Q64ET8 278 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 GRHL2Q6ISB3 625 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 PPP4R4Q6NUP7 873 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 TMEM220Q6QAJ8 160 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 AGTRAPQ6RW13 159 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 GET4Q7L5D6 327 aaPredicted RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 THOC6Q86W42 341 aaKnown RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 MSRB3Q8IXL7 192 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 RIMKLAQ8IXN7 391 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 CPA6Q8N4T0 437 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 AADATQ8N5Z0 425 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 MFSD2AQ8NA29 543 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 TRPV3Q8NET8 790 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 PYCR2Q96C36 320 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 CHFRQ96EP1 664 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 WDR34Q96EX3 536 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 C11orf24Q96F05 449 aaPredicted RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 COX14Q96I36 57 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 ZNF514Q96K75 400 aaPredicted RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 TMEM74Q96NL1 305 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 FRG2BQ96QU4 278 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 MYCBPQ99417 103 aaPredicted RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 KCNH6Q9H252 994 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 Q9H521 79 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 C8orf4Q9NR00 106 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 AGPAT4Q9NRZ5 378 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 SPATA6Q9NWH7 488 aaPredicted RBP9.54□□□□□ -0.88
USP39-214ENST00000474572 THG1LQ9NWX6 298 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms