RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 LINC00614P0C842 121 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZNF26P17031 533 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 TACR2P21452 398 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 DTYMKP23919 212 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ADH6P28332 368 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 IL12RB1P42701 662 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SUMO3P55854 103 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 KIAA1024LP59773 190 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ERVS71-1P61550 626 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 HTRA4P83105 476 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZNF91Q05481 1191 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 KLF10Q13118 480 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SNX17Q15036 470 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SHBQ15464 509 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 KIZQ2M2Z5 673 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PGS1Q32NB8 556 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZIK1Q3SY52 487 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 LRRC24Q50LG9 513 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 LBHQ53QV2 105 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 TOR2AQ5JU69 321 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 DCST1Q5T197 706 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 GCNT6Q5T4J0 391 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF5Q5TYX0 476 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF9Q5VWM5 478 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF6Q5VXH4 476 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 FBXO42Q6P3S6 717 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TMEM65Q6PI78 240 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 LRRC74BQ6ZQY2 392 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 FAM35AQ86V20 835 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 THOC6Q86W42 341 aaKnown RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 NRROSQ86YC3 692 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 C4orf33Q8N1A6 199 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 KDM8Q8N371 416 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 GPRC5AQ8NFJ5 357 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZNF398Q8TD17 642 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 GDPD5Q8WTR4 605 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SNX33Q8WV41 574 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 MAP4K1Q92918 833 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 RILPQ96NA2 401 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 MMP19Q99542 508 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PKP2Q99959 881 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 LBHD1Q9BQE6 289 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZNF577Q9BSK1 485 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TRMOQ9BU70 441 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CEP41Q9BYV8 373 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SLC25A18Q9H1K4 315 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TTYH1Q9H313 450 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 ABHD16BQ9H3Z7 469 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 KLHL1Q9NR64 748 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TXLNGQ9NUQ3 528 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 IMP3Q9NV31 184 aaKnown RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 MAT2BQ9NZL9 334 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 BCAP29Q9UHQ4 241 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 GDF2Q9UK05 429 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 RAB23Q9ULC3 237 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PADI1Q9ULC6 663 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 KCTD3Q9Y597 815 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ACTL7AQ9Y615 435 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 NCOA1Q15788 1441 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TAF1P21675 1872 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 MSH6P52701 1360 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 A0A0A6YYK5 440 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 POTEB3A0JP26 581 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 NPIPB15A6NHN6 443 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 LRRN3E7EW58 273 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SEPT4O43236 478 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TLX2O43763 284 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 CXCL14O95715 111 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CDK1P06493 297 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 GSTA1P08263 222 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CELA3AP09093 270 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CCNYL3P0C7X3 344 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CALCBP10092 127 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ACRP10323 421 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 THRAP10827 490 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 MCF2P10911 925 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PIM1P11309 404 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 ITGA6P23229 1130 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CST5P28325 142 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 ARL3P36405 182 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 LTBRP36941 435 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 MAP3K8P41279 467 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 MC3RP41968 323 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TPMTP51580 245 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DGKQP52824 942 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DMWDQ09019 674 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 BAMBIQ13145 260 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 MMRN1Q13201 1228 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DRAP1Q14919 205 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 KPNB1Q14974 876 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 ESCO2Q56NI9 601 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 UBE2UQ5VVX9 321 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PAPD7Q5XG87 772 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 POTEBQ6S5H4 581 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 MPZL3Q6UWV2 235 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 NHLRC1Q6VVB1 395 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 USP53Q70EK8 1073 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DPPA4Q7L190 304 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SERPINA12Q8IW75 414 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms