RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PDLIM5Q96HC4 596 aaKnown RBP12.01□□□□□ -0.49
DDX56-209ENST00000473924 PKP4Q99569 1192 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 CCDC77Q9BR77 488 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 SLC12A9Q9BXP2 914 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 TXLNGYQ9BZA5 131 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 CCDC86Q9H6F5 360 aaKnown RBP12.01□□□□□ -0.49
DDX56-209ENST00000473924 PARVBQ9HBI1 364 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 C1GALT1Q9NS00 363 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 OCIAD1Q9NX40 245 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 SOHLH2Q9NX45 425 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 SPHK1Q9NYA1 384 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 ADAMTS6Q9UKP5 1117 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 A0A1W2PNU3 283 aaPredicted RBP12□□□□□ -0.49
DDX56-209ENST00000473924 PMS2P1A4D2B8 440 aa12□□□□□ -0.49
DDX56-209ENST00000473924 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
DDX56-209ENST00000473924 C1QTNF9BB2RNN3 333 aa12□□□□□ -0.49
DDX56-209ENST00000473924 KRT38O76015 456 aa12□□□□□ -0.49
DDX56-209ENST00000473924 ZBTB11O95625 1053 aaPredicted RBP12□□□□□ -0.49
DDX56-209ENST00000473924 SLC16A8O95907 504 aa12□□□□□ -0.49
DDX56-209ENST00000473924 C1QTNF9P0C862 333 aa12□□□□□ -0.49
DDX56-209ENST00000473924 CCDC166P0CW27 439 aa12□□□□□ -0.49
DDX56-209ENST00000473924 NELFEP18615 380 aaKnown RBP12□□□□□ -0.49
DDX56-209ENST00000473924 CRABP2P29373 138 aa12□□□□□ -0.49
DDX56-209ENST00000473924 PNLIPRP1P54315 467 aa12□□□□□ -0.49
DDX56-209ENST00000473924 HSD11B2P80365 405 aa12□□□□□ -0.49
DDX56-209ENST00000473924 FOXM1Q08050 763 aa12□□□□□ -0.49
DDX56-209ENST00000473924 ARHGAP19Q14CB8 494 aa12□□□□□ -0.49
DDX56-209ENST00000473924 SF1Q15637 639 aaKnown RBP12□□□□□ -0.49
DDX56-209ENST00000473924 ZKSCAN8Q15776 578 aaPredicted RBP12□□□□□ -0.49
DDX56-209ENST00000473924 SLC5A12Q1EHB4 618 aa12□□□□□ -0.49
DDX56-209ENST00000473924 TMTC4Q5T4D3 741 aa12□□□□□ -0.49
DDX56-209ENST00000473924 TMEM164Q5U3C3 297 aa12□□□□□ -0.49
DDX56-209ENST00000473924 FBXO38Q6PIJ6 1188 aa12□□□□□ -0.49
DDX56-209ENST00000473924 FRA10AC1Q70Z53 315 aa12□□□□□ -0.49
DDX56-209ENST00000473924 CMC1Q7Z7K0 106 aa12□□□□□ -0.49
DDX56-209ENST00000473924 TBC1D1Q86TI0 1168 aaPredicted RBP12□□□□□ -0.49
DDX56-209ENST00000473924 KMT5CQ86Y97 462 aa12□□□□□ -0.49
DDX56-209ENST00000473924 SYTL1Q8IYJ3 562 aa12□□□□□ -0.49
DDX56-209ENST00000473924 MDM1Q8TC05 714 aa12□□□□□ -0.49
DDX56-209ENST00000473924 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
DDX56-209ENST00000473924 ANKRD49Q8WVL7 239 aa12□□□□□ -0.49
DDX56-209ENST00000473924 KLHL6Q8WZ60 621 aa12□□□□□ -0.49
DDX56-209ENST00000473924 SMPDL3AQ92484 453 aa12□□□□□ -0.49
DDX56-209ENST00000473924 CCDC138Q96M89 665 aa12□□□□□ -0.49
DDX56-209ENST00000473924 PPM1MQ96MI6 270 aa12□□□□□ -0.49
DDX56-209ENST00000473924 SLC46A1Q96NT5 459 aa12□□□□□ -0.49
DDX56-209ENST00000473924 OR2A14Q96R47 310 aa12□□□□□ -0.49
DDX56-209ENST00000473924 THSD1Q9NS62 852 aa12□□□□□ -0.49
DDX56-209ENST00000473924 ABCF3Q9NUQ8 709 aa12□□□□□ -0.49
DDX56-209ENST00000473924 SLC39A1Q9NY26 324 aa12□□□□□ -0.49
DDX56-209ENST00000473924 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12□□□□□ -0.49
DDX56-209ENST00000473924 CTNNAL1Q9UBT7 734 aa12□□□□□ -0.49
DDX56-209ENST00000473924 TLK1Q9UKI8 766 aa12□□□□□ -0.49
DDX56-209ENST00000473924 PDE10AQ9Y233 779 aa12□□□□□ -0.49
DDX56-209ENST00000473924 KIF26BQ2KJY2 2108 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 A0A0J9YY10 115 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 NPEPPSL1A6NEC2 478 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 B4E171 279 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 CDC7O00311 574 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 ENO2P09104 434 aaPredicted RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 FGF3P11487 239 aaPredicted RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 ST6GAL1P15907 406 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 CNTFP26441 200 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 TYK2P29597 1187 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 OAS2P29728 719 aaKnown RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 PEBP1P30086 187 aaKnown RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 RPA3P35244 121 aaPredicted RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 ETV5P41161 510 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 TSPAN7P41732 249 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 SERPINB8P50452 374 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 FASTKQ14296 549 aaKnown RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 CSHL1Q14406 222 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 CYP2A13Q16696 494 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 PHKG1Q16816 387 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 TAF1BQ53T94 588 aaPredicted RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 LGSNQ5TDP6 509 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 THEMIS2Q5TEJ8 643 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 CYB5D1Q6P9G0 228 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 SUSD1Q6UWL2 747 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 TRIM73Q86UV7 250 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 RASGRP3Q8IV61 690 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 SPATA6LQ8N4H0 392 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 HMGCLL1Q8TB92 370 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 ZNF480Q8WV37 535 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 ANKRD7Q92527 254 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 DLG3Q92796 817 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 USP7Q93009 1102 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 PRR11Q96HE9 360 aaPredicted RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 SLC41A2Q96JW4 573 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 OR6C1Q96RD1 312 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 TAAR9Q96RI9 348 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 PARD6BQ9BYG5 372 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 PITPNM3Q9BZ71 974 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 UNKQ9C0B0 810 aaKnown RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 DERL2Q9GZP9 239 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 KLHL25Q9H0H3 589 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 PDE7BQ9NP56 450 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 SNX15Q9NRS6 342 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 ARL15Q9NXU5 204 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms