RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SAYSD1Q9NPB0 183 aa18.29■□□□□ 0.52
PTCD3-210ENST00000473829 MOCS1Q9NZB8 636 aa18.29■□□□□ 0.52
PTCD3-210ENST00000473829 KLHL42Q9P2K6 505 aa18.29■□□□□ 0.52
PTCD3-210ENST00000473829 RARRES3Q9UL19 164 aa18.29■□□□□ 0.52
PTCD3-210ENST00000473829 FAM208BQ5VWN6 2430 aa18.29■□□□□ 0.52
PTCD3-210ENST00000473829 ATMQ13315 3056 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 A0A0J9YY10 115 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 VPS26AO75436 327 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 MCM3P25205 808 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 PGGT1BP53609 377 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 PLTPP55058 493 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 VAC14Q08AM6 782 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 KIR2DS3Q14952 304 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 C8orf74Q6P047 294 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 CYHR1Q6ZMK1 362 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 CDHR3Q6ZTQ4 885 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 NEK10Q6ZWH5 1172 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 PIWIL4Q7Z3Z4 852 aaKnown RBP18.28■□□□□ 0.52
PTCD3-210ENST00000473829 IL22RA1Q8N6P7 574 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 C19orf47Q8N9M1 422 aaKnown RBP18.28■□□□□ 0.52
PTCD3-210ENST00000473829 NOA1Q8NC60 698 aaKnown RBP18.28■□□□□ 0.52
PTCD3-210ENST00000473829 GABPB2Q8TAK5 448 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-210ENST00000473829 SNRNP27Q8WVK2 155 aaKnown RBP18.28■□□□□ 0.52
PTCD3-210ENST00000473829 INPP5DQ92835 1189 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 TRIM44Q96DX7 344 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-210ENST00000473829 SMYD2Q9NRG4 433 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 LNPEPQ9UIQ6 1025 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 SLC39A10Q9ULF5 831 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 KLHL20Q9Y2M5 609 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 SPTBP11277 2137 aa18.28■□□□□ 0.52
PTCD3-210ENST00000473829 IGSF10Q6WRI0 2623 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 LOC101059948A0A1B0GTJ6 334 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 HCRTR1O43613 425 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 PRICKLE3O43900 615 aaPredicted RBP18.27■□□□□ 0.52
PTCD3-210ENST00000473829 PIAS1O75925 651 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 MPC1LP0DKB6 136 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 LIFP15018 202 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 PSMB5P28074 263 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 SSTR1P30872 391 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 CCNFP41002 786 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 MGAT5Q09328 741 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 SLC5A12Q1EHB4 618 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 TMTC4Q5T4D3 741 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 PRAMEF17Q5VTA0 474 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 TTC23LQ6PF05 361 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 GPR155Q7Z3F1 870 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 GALNT6Q8NCL4 622 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 OR1L3Q8NH93 324 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 RAB11FIP5Q9BXF6 653 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 TRMT6Q9UJA5 497 aaKnown RBP18.27■□□□□ 0.52
PTCD3-210ENST00000473829 PCDHGA4Q9Y5G9 962 aa18.27■□□□□ 0.52
PTCD3-210ENST00000473829 A0A1W2PPV9 198 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 MYO1CO00159 1063 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 EIF3HO15372 352 aaKnown RBP eCLIP18.26■□□□□ 0.51
PTCD3-210ENST00000473829 ERGP11308 486 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 ENO3P13929 434 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-210ENST00000473829 STAT5AP42229 794 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 GABRA4P48169 554 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 MAP7Q14244 749 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 FASTKQ14296 549 aaKnown RBP18.26■□□□□ 0.51
PTCD3-210ENST00000473829 DEFB110Q30KQ9 67 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 CYB5D1Q6P9G0 228 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 PAQR3Q6TCH7 311 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 GPATCH11Q8N954 259 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 PYROXD1Q8WU10 500 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 ASB11Q8WXH4 323 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 PKP4Q99569 1192 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 OLFM1Q99784 485 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 TAS2R13Q9NYV9 303 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 SPATA7Q9P0W8 599 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 ZFATQ9P243 1243 aa18.26■□□□□ 0.51
PTCD3-210ENST00000473829 TMEM150CB9EJG8 249 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 KIF2AO00139 706 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-210ENST00000473829 CATP04040 527 aaKnown RBP18.25■□□□□ 0.51
PTCD3-210ENST00000473829 NTRK1P04629 796 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 CTSBP07858 339 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 MSL3P1P0C860 447 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 CBSLP0DN79 551 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 MAGP20916 626 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 FDXRP22570 491 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 MAP4P27816 1152 aaKnown RBP18.25■□□□□ 0.51
PTCD3-210ENST00000473829 CBSP35520 551 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 GPX6P59796 221 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 ABHD18Q0P651 414 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 CYP2A13Q16696 494 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 HECTD2Q5U5R9 776 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 KIAA1614Q5VZ46 1190 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 C6orf15Q6UXA7 325 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-210ENST00000473829 BPHLQ86WA6 291 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-210ENST00000473829 MMGT1Q8N4V1 131 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 ESX1Q8N693 406 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 SLC38A9Q8NBW4 561 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 OR9A1PQ8NGU1 263 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 HMGCLL1Q8TB92 370 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 MAGEC3Q8TD91 643 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 EEF1AKMT1Q8WVE0 214 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 SEC14L1Q92503 715 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 DLG3Q92796 817 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 FCRL4Q96PJ5 515 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms