RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ULBP3Q9BZM4 244 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 XPO4Q9C0E2 1151 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 NAT10Q9H0A0 1025 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 NUP62CLQ9H1M0 184 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 VPS16Q9H269 839 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 DHX35Q9H5Z1 703 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 FANCEQ9HB96 536 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PDE7BQ9NP56 450 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PRDM8Q9NQV8 689 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FAM207AQ9NSI2 230 aaPredicted RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 POT1Q9NUX5 634 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 C14orf119Q9NWQ9 140 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 GPRC5BQ9NZH0 403 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PKD2L2Q9NZM6 624 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CHMP5Q9NZZ3 219 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PDP2Q9P2J9 529 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 TRPS1Q9UHF7 1281 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PNMA8BQ9ULN7 279 aaPredicted RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 SUFUQ9UMX1 484 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 SIK3Q9Y2K2 1263 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 A0A0J9YYE9 177 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CLEC18AA5D8T8 446 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 GOLGA6L3A6NEY3 463 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 LGALS16A8MUM7 142 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 RNF103O00237 685 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 INSIG1O15503 277 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 B4GAT1O43505 415 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 KCNJ13O60928 360 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 RASSF9O75901 435 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 PGLSO95336 258 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 VIPP01282 170 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 TRBC1P01850 177 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 IGHEP01854 428 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ALPPP05187 535 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 FGF1P05230 155 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CD63P08962 238 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 LTA4HP09960 611 aaKnown RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 PNMA6AP0CW24 399 aaPredicted RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 PRKAR1AP10644 381 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 FGF3P11487 239 aaPredicted RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 GZMAP12544 262 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CCL4P13236 92 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ERCC2P18074 760 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 DLSTP36957 453 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ETV5P41161 510 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 HALP42357 657 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CAPZBP47756 277 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 SLC6A9P48067 706 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CLCNKAP51800 687 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 PGDP52209 483 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 PMS2P54278 862 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 MAZP56270 477 aaKnown RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 DCDC1P59894 354 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 RPS15P62841 145 aaKnown RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 SRSF2Q01130 221 aaKnown RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 MYL5Q02045 173 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 APBA1Q02410 837 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ACY1Q03154 408 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 GTF2H3Q13889 308 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CLCA4Q14CN2 919 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CYTH1Q15438 398 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ELAVL1Q15717 326 aaKnown RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 ADRM1Q16186 407 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 DPYSL2Q16555 572 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CAMK4Q16566 473 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 HADHQ16836 314 aaKnown RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 MUM1Q2TAK8 710 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 MST1LQ2TV78 715 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 DPCR1Q3MIW9 517 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 PYCR3Q53H96 274 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 C2CD6Q53TS8 623 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 C19orf54Q5BKX5 351 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ANKRD20A8PQ5CZ79 823 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ZNF569Q5MCW4 686 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 LRRC66Q68CR7 880 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 TRNP1Q6NT89 227 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 DOK6Q6PKX4 331 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CLEC18BQ6UXF7 455 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 LEKR1Q6ZMV7 388 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ASB18Q6ZVZ8 466 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 RHOUQ7L0Q8 258 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 PRSS42Q7Z5A4 293 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ARHGAP22Q7Z5H3 698 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 SYVN1Q86TM6 617 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 PPP1R3BQ86XI6 285 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 KMT5CQ86Y97 462 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 RASGRP3Q8IV61 690 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 APLFQ8IW19 511 aaPredicted RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 MAP7D3Q8IWC1 876 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 NAGSQ8N159 534 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 AOPEPQ8N6M6 819 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 BMPERQ8N8U9 685 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 CLEC18CQ8NCF0 446 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 OR52N2Q8NGI0 321 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 OR8K5Q8NH50 307 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 JOSD2Q8TAC2 188 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 SLC30A5Q8TAD4 765 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 SLC37A2Q8TED4 501 aa3.44□□□□□ -1.86
XRN1-209ENST00000472625 ZNF483Q8TF39 744 aaPredicted RBP3.44□□□□□ -1.86
XRN1-209ENST00000472625 SLC20A1Q8WUM9 679 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms