RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 KLHL8Q9P2G9 620 aaPredicted RBP8.96□□□□□ -0.98
VCL-204ENST00000472585 PLAGL1Q9UM63 463 aa8.96□□□□□ -0.98
VCL-204ENST00000472585 LUC7L2Q9Y383 392 aaKnown RBP8.96□□□□□ -0.98
VCL-204ENST00000472585 HEBP2Q9Y5Z4 205 aa8.96□□□□□ -0.98
VCL-204ENST00000472585 HS3ST3B1Q9Y662 390 aa8.96□□□□□ -0.98
VCL-204ENST00000472585 TRBV5-4A0A0C4DH59 114 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 KLHL33A6NCF5 533 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 ZSCAN9O15535 394 aaPredicted RBP8.95□□□□□ -0.98
VCL-204ENST00000472585 ONECUT2O95948 504 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 CHRM5P08912 532 aaPredicted RBP8.95□□□□□ -0.98
VCL-204ENST00000472585 CD99P14209 185 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 COMTP21964 271 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 MMP11P24347 488 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 MCM3P25205 808 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 MARCKSL1P49006 195 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 TDGF1P3P51864 188 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 ZNF140P52738 457 aaPredicted RBP8.95□□□□□ -0.98
VCL-204ENST00000472585 KRTAP10-9P60411 292 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 SPARCL1Q14515 664 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 NKG7Q16617 165 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 PRAMEF13Q5VWM6 474 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 LUZP1Q86V48 1076 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 CEP97Q8IW35 865 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 GPR135Q8IZ08 494 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 PROKR1Q8TCW9 393 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 PSMF1Q92530 271 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 N4BP2L2Q92802 583 aaPredicted RBP8.95□□□□□ -0.98
VCL-204ENST00000472585 USB1Q9BQ65 265 aaKnown RBP8.95□□□□□ -0.98
VCL-204ENST00000472585 MENTQ9BUN1 341 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 AP1M1Q9BXS5 423 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 CHRNA10Q9GZZ6 450 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 NAT10Q9H0A0 1025 aaKnown RBP8.95□□□□□ -0.98
VCL-204ENST00000472585 SPTLC3Q9NUV7 552 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 AP1M2Q9Y6Q5 423 aa8.95□□□□□ -0.98
VCL-204ENST00000472585 hCG_1818297A0A087WSY0 165 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 C2orf81A6NN90 581 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 FAM155BO75949 473 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 PYGMP11217 842 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 DRD2P14416 443 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 ALAS2P22557 587 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 RBL1P28749 1068 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 GRIA3P42263 894 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 ARHGAP25P42331 645 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 SMSP52788 366 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 CASP6P55212 293 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 UBASH3AP57075 661 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 TLE4Q04727 773 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 GRB7Q14451 532 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 CDSNQ15517 529 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 SARM1Q6SZW1 724 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 LINC00696Q6ZRV3 163 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 OVCH1Q7RTY7 1134 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 SNX20Q7Z614 316 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 SERPINA9Q86WD7 417 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 LINC01555Q8NAE3 123 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 OR11G2Q8NGC1 345 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 C14orf79Q96F83 325 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 DCUN1D1Q96GG9 259 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 DNAJC1Q96KC8 554 aaKnown RBP8.94□□□□□ -0.98
VCL-204ENST00000472585 QKIQ96PU8 341 aaKnown RBP eCLIP8.94□□□□□ -0.98
VCL-204ENST00000472585 COPS8Q99627 209 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 GBA3Q9H227 469 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 SOX17Q9H6I2 414 aaPredicted RBP8.94□□□□□ -0.98
VCL-204ENST00000472585 ZDHHC3Q9NYG2 299 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 EURLQ9NYK6 297 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 PLA2G3Q9NZ20 509 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 CTSFQ9UBX1 484 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 CIDEBQ9UHD4 219 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 RSPH14Q9UHP6 348 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 CRLS1Q9UJA2 301 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 SH3BGRL2Q9UJC5 107 aa8.94□□□□□ -0.98
VCL-204ENST00000472585 ACANP16112 2415 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 A0A0J9YY10 115 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 SLC5A10A0PJK1 596 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 C5orf60A6NFR6 353 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 VSTM2BA6NLU5 285 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 IFRD1O00458 451 aaPredicted RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 PCDH17O14917 1159 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 FANCGO15287 622 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 ESRRAP11474 423 aaPredicted RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 ACRV1P26436 265 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 PSMB4P28070 264 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 MC4RP32245 332 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 OR1D4P47884 311 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 ART1P52961 327 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 RBPJQ06330 500 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 RPA4Q13156 261 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 BRD3Q15059 726 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 TCEAL1Q15170 157 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 DBN1Q16643 649 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.93□□□□□ -0.98
VCL-204ENST00000472585 RPUSD3Q6P087 351 aaKnown RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 TLDC1Q6P9B6 456 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 TTLL10Q6ZVT0 673 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 MCATQ8IVS2 390 aaKnown RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 C2orf73Q8N5S3 287 aaPredicted RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 METTL27Q8N6F8 245 aaPredicted RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 OR1N1Q8NGS0 311 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.93□□□□□ -0.98
VCL-204ENST00000472585 MTFMTQ96DP5 389 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms