RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 F5P12259 2224 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 IGHV1OR15-9A0A0B4J2B8 117 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 H0Y8X5 98 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 H0YHG0 523 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 MANBAO00462 879 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 KRT6AP02538 564 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 KRT6BP04259 564 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 ALDOCP09972 364 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 THRAP10827 490 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 COX4I1P13073 169 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 IDO1P14902 403 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 JUPP14923 745 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 EZRP15311 586 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 IDSP22304 550 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 CCND1P24385 295 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 HSD17B2P37059 387 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 RPS9P46781 194 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 GNPDA1P46926 289 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 RABIFP47224 123 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 CPA2P48052 419 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 KRT6CP48668 564 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 CLCNKAP51800 687 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 THOP1P52888 689 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 PNLIPRP1P54315 467 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 STX1BP61266 288 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 ERVK-8P63133 956 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 KCNJ2P63252 427 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 GRIK2Q13002 908 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 NAE1Q13564 534 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 LRP8Q14114 963 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 E2F2Q14209 437 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 PTK2BQ14289 1009 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 ARHGAP19Q14CB8 494 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 ABRAXAS2Q15018 415 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 MAPRE2Q15555 327 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 GSTA3Q16772 222 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 SMU1Q2TAY7 513 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 DNAL1Q4LDG9 190 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 LIPJQ5W064 366 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 CAPRIN2Q6IMN6 1127 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 RINLQ6ZS11 566 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 TRIM46Q7Z4K8 759 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 SPATA19Q7Z5L4 167 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 ABI3BPQ7Z7G0 1075 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 LRRC56Q8IYG6 542 aaPredicted RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 SPEM1Q8N4L4 309 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 KIF2BQ8N4N8 673 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 OR5AR1Q8NGP9 310 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 USP7Q93009 1102 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 MED8Q96G25 268 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 PDXPQ96GD0 296 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 BMFQ96LC9 184 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 OR4K3Q96R72 315 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 MIPEPQ99797 713 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 IER2Q9BTL4 223 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 SGPP1Q9BX95 441 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 COL25A1Q9BXS0 654 aaPredicted RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 PCED1AQ9H1Q7 454 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 TRIT1Q9H3H1 467 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 CARS2Q9HA77 564 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 MRPL40Q9NQ50 206 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 CCDC177Q9NQR7 707 aaPredicted RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 GPR27Q9NS67 375 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 INTS7Q9NVH2 962 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 AIG1Q9NVV5 245 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 TMEM45AQ9NWC5 275 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 KLQ9UEF7 1012 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 G3BP2Q9UN86 482 aaKnown RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 SNX6Q9UNH7 406 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 PSMD13Q9UNM6 376 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 CA5BQ9Y2D0 317 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.11□□□□□ -0.95
VPS52-216ENST00000471309 RNF11Q9Y3C5 154 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 CCL27Q9Y4X3 112 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 HS3ST3A1Q9Y663 406 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
VPS52-216ENST00000471309 XIRP2A4UGR9 3374 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 ZNF839A8K0R7 811 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 B2RBV5 119 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 E7ENX8 843 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 NPIPB8E9PQR5 432 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 PSMD12O00232 456 aaPredicted RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 SLC28A1O00337 649 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 CLGNO14967 610 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 LSM1O15116 133 aaKnown RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 GYG2O15488 501 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 RGS14O43566 566 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 PRAMEF4O60810 478 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 ULK1O75385 1050 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 WFS1O76024 890 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 GNAZP19086 355 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 HNF4AP41235 474 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 CASP2P42575 452 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 CTBSQ01459 385 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 IRF8Q02556 426 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 TAP2Q03519 686 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 CHIT1Q13231 466 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 CYLC2Q14093 348 aaPredicted RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 FASTKQ14296 549 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms