RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TMEM109Q9BVC6 243 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 EPB41L4BQ9H329 900 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZFYVE1Q9HBF4 777 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 IFT80Q9P2H3 777 aaPredicted RBP8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 WDR37Q9Y2I8 494 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 TTLL3Q9Y4R7 772 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 DNMT3AQ9Y6K1 912 aaPredicted RBP8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 AP1M2Q9Y6Q5 423 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 COLEC10Q9Y6Z7 277 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 PCSK5Q92824 1860 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 SPTBP11277 2137 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 CNTRLQ7Z7A1 2325 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 TCRBV7S2A1N4TA0A589 114 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 MATN3O15232 486 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZNF749O43361 778 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 PRLP01236 227 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 MYBL1P10243 752 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ESRRAP11474 423 aaPredicted RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 CD99P14209 185 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 CHN1P15882 459 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 AMPD1P23109 780 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 NDUFS1P28331 727 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 MIPP30301 263 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 KCNJ1P48048 391 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 KCNK10P57789 538 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 DCDP81605 110 aaKnown RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ACTN3Q08043 901 aaPredicted RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 TMEM115Q12893 351 aaPredicted RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 KRT33BQ14525 404 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 PRKD1Q15139 912 aaPredicted RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 QPCTQ16769 361 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 BOLA3Q53S33 107 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 PRAMEF13Q5VWM6 474 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 FBXW10Q5XX13 1052 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ALG1LQ6GMV1 187 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 GFRALQ6UXV0 394 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 SYDE1Q6ZW31 735 aaPredicted RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 TRMT10CQ7L0Y3 403 aaKnown RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZNF547Q8IVP9 402 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 MCOLN2Q8IZK6 566 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCDC197Q8NCU1 140 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 OR1L3Q8NH93 324 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 GRK7Q8WTQ7 553 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 C1orf54Q8WWF1 131 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 CHMP6Q96FZ7 201 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 MAGEB10Q96LZ2 347 aaPredicted RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 LMF1Q96S06 567 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 SRPK1Q96SB4 655 aaKnown RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZCCHC2Q9C0B9 1178 aaKnown RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 NSRP1Q9H0G5 558 aaKnown RBP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 MCCC2Q9HCC0 563 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 RBM22Q9NW64 420 aaKnown RBP eCLIP8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 WHRNQ9P202 907 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ASIC3Q9UHC3 531 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 ANAPC7Q9UJX3 599 aa8.62□□□□□ -1.03
SYNGAP1-205ENST00000470232 RASGRF2O14827 1237 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 PCDH17O14917 1159 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 RIPK2O43353 540 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 MTX2O75431 263 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 POP7O75817 140 aaKnown RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 MTHFD1P11586 935 aaKnown RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 HOXB4P17483 251 aaPredicted RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 POLR2CP19387 275 aaPredicted RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 SLC1A1P43005 524 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 KPNA2P52292 529 aaKnown RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 GTF2A1P52655 376 aaPredicted RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 OGDHQ02218 1023 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 DSC2Q02487 901 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 TLE4Q04727 773 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 DMPKQ09013 629 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 MAMLD1Q13495 774 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 SNX1Q13596 522 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 PTK6Q13882 451 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 SLC29A2Q14542 456 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 INAQ16352 499 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 SMTNL2Q2TAL5 461 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 GKAP1Q5VSY0 366 aaPredicted RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 ICE2Q659A1 982 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 C6orf89Q6UWU4 347 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 TAOK1Q7L7X3 1001 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 POLNQ7Z5Q5 900 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 CEP97Q8IW35 865 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 MMP21Q8N119 569 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 GPR26Q8NDV2 337 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 OR1N1Q8NGS0 311 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 GPR150Q8NGU9 434 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 PROKR1Q8TCW9 393 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 NR4A3Q92570 626 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 P3H4Q92791 437 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 MTFMTQ96DP5 389 aaKnown RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 CABS1Q96KC9 395 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 VPS35Q96QK1 796 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 PEBP4Q96S96 227 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 KCNK17Q96T54 332 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 SPOCK3Q9BQ16 436 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 GPR63Q9BZJ6 419 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms