RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DCAF10Q5QP82 559 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 HIVEP3Q5T1R4 2406 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 MRPL14Q6P1L8 145 aaKnown RBP16.83■□□□□ 0.28
COL7A1-208ENST00000470076 UNC5DQ6UXZ4 953 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 SLC13A5Q86YT5 568 aaPredicted RBP16.83■□□□□ 0.28
COL7A1-208ENST00000470076 DCUN1D3Q8IWE4 304 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 PPHLN1Q8NEY8 458 aaKnown RBP16.83■□□□□ 0.28
COL7A1-208ENST00000470076 DLG3Q92796 817 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 PTERQ96BW5 349 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 MFRPQ9BY79 579 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 SLC29A3Q9BZD2 475 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 EURLQ9NYK6 297 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 PAK5Q9P286 719 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 TEX15Q9BXT5 2789 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 S1PR4O95977 384 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 ALPPP05187 535 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 CTSBP07858 339 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 MAGP20916 626 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 TTPAP49638 278 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 RAPSNQ13702 412 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 SEMA3AQ14563 771 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 MYBPC3Q14896 1274 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 TMED2Q15363 201 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 VRK3Q8IV63 474 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 CCDC89Q8N998 374 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 LINC01555Q8NAE3 123 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 DENND1AQ8TEH3 1009 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 C1orf54Q8WWF1 131 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 MENTQ9BUN1 341 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 CATSPERZQ9NTU4 200 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 INTS7Q9NVH2 962 aaKnown RBP16.82■□□□□ 0.28
COL7A1-208ENST00000470076 P4HTMQ9NXG6 502 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 LUZP4Q9P127 313 aa16.82■□□□□ 0.28
COL7A1-208ENST00000470076 PCM1Q15154 2024 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 UNC79Q9P2D8 2635 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 PRMT5O14744 637 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-208ENST00000470076 SLCO2B1O94956 709 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 AOAHP28039 575 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 ARSFP54793 590 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 SLC9A5Q14940 896 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 PRR30Q53SZ7 412 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-208ENST00000470076 PCID2Q5JVF3 399 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 MCATQ8IVS2 390 aaKnown RBP16.81■□□□□ 0.28
COL7A1-208ENST00000470076 GALNT16Q8N428 558 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 OR2L8Q8NGY9 312 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 CFAP61Q8NHU2 1237 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 LKAAEAR1Q8TD35 194 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 NACC2Q96BF6 587 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 TSGA10Q9BZW7 698 aa16.81■□□□□ 0.28
COL7A1-208ENST00000470076 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-208ENST00000470076 NUP210LQ5VU65 1888 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 A0A1B0GX78 115 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 IQCF5A8MTL0 148 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 RASGRF2O14827 1237 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 CD3EAPO15446 510 aaKnown RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 KRT86O43790 486 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 CNOT3O75175 753 aaKnown RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 IPO13O94829 963 aaKnown RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 FKBP9O95302 570 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 ATXN8OSP0DMR3 200 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 PIM1P11309 404 aaPredicted RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 ETS1P14921 441 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 ALAS2P22557 587 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 CDC25BP30305 580 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 GCGRP47871 477 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 SOX8P57073 446 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 SNX1Q13596 522 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 GRB7Q14451 532 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 CYP2A13Q16696 494 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 ZC3H12BQ5HYM0 836 aaKnown RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 YOD1Q5VVQ6 348 aaPredicted RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 PTRHD1Q6GMV3 140 aaKnown RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 TTC23LQ6PF05 361 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 IGFL3Q6UXB1 125 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 PPP1R32Q7Z5V6 425 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 PRUNE1Q86TP1 453 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 FAM20CQ8IXL6 584 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 IQCKQ8N0W5 287 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 GSDMBQ8TAX9 411 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 SSC4DQ8WTU2 575 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 FKBP10Q96AY3 582 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 PANX3Q96QZ0 392 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 RAB11FIP5Q9BXF6 653 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 EIF2B3Q9NR50 452 aaKnown RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 CHRAC1Q9NRG0 131 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 CUEDC1Q9NWM3 386 aaPredicted RBP16.8■□□□□ 0.28
COL7A1-208ENST00000470076 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 SLC39A10Q9ULF5 831 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 B3GNT3Q9Y2A9 372 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 KLHL20Q9Y2M5 609 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 MRFAP1Q9Y605 127 aa16.8■□□□□ 0.28
COL7A1-208ENST00000470076 TCP11X1B4DZS4 312 aa16.79■□□□□ 0.28
COL7A1-208ENST00000470076 AP3B1O00203 1094 aa16.79■□□□□ 0.28
COL7A1-208ENST00000470076 KPNA5O15131 536 aa16.79■□□□□ 0.28
COL7A1-208ENST00000470076 ONECUT2O95948 504 aa16.79■□□□□ 0.28
COL7A1-208ENST00000470076 UMODP07911 640 aa16.79■□□□□ 0.28
COL7A1-208ENST00000470076 SF1Q15637 639 aaKnown RBP16.79■□□□□ 0.28
COL7A1-208ENST00000470076 CCNG2Q16589 344 aa16.79■□□□□ 0.28
COL7A1-208ENST00000470076 TCTE1Q5JU00 501 aa16.79■□□□□ 0.28
COL7A1-208ENST00000470076 C4orf22Q6V702 233 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms