RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 Q6ZNB5 142 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 GCNT7Q6ZNI0 430 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 DCDC5Q6ZRR9 648 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 MSANTD1Q6ZTZ1 278 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 RBM12BQ8IXT5 1001 aaKnown RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 FAM9CQ8IZT9 166 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 PGBD3Q8N328 593 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 DDHD1Q8NEL9 900 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 CHPT1Q8WUD6 406 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 VOPP1Q96AW1 172 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 BCL7BQ9BQE9 202 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 VN1R3Q9BXE9 311 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 TRIT1Q9H3H1 467 aaKnown RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 PAK1IP1Q9NWT1 392 aaPredicted RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 KCTD5Q9NXV2 234 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ENPP5Q9UJA9 477 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 DLGAP4Q9Y2H0 992 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 PLXNB3Q9ULL4 1909 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 A0A1W2PQ45 241 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-209ENST00000470026 A0A1W2PQY0 241 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 GNGT2O14610 69 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 SERPINA1P01009 418 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 SPAM1P38567 509 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 BCL2L1Q07817 233 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 AQP6Q13520 282 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 GBX1Q14549 363 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 SHQ1Q6PI26 577 aaKnown RBP13.32□□□□□ -0.28
BRCA1-209ENST00000470026 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 LRRC70Q7Z2Q7 622 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 TMEM150AQ86TG1 271 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 TMEM132CQ8N3T6 1108 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 BEND7Q8N7W2 519 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-209ENST00000470026 ARL10Q8N8L6 244 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 FRS2Q8WU20 508 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 ULK4Q96C45 1275 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
BRCA1-209ENST00000470026 ITCHQ96J02 903 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 ZIC5Q96T25 663 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 CLSTN3Q9BQT9 956 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 FUNDC2Q9BWH2 189 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 TM6SF2Q9BZW4 377 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 RAD21L1Q9H4I0 556 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
BRCA1-209ENST00000470026 RNF186Q9NXI6 227 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 LRFN2Q9ULH4 789 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 CORINQ9Y5Q5 1042 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
BRCA1-209ENST00000470026 PER2O15055 1255 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 SMAD6O43541 496 aaKnown RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 BCAS1O75363 584 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 SULT1C4O75897 302 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 PDYNP01213 254 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 HNRNPCP07910 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ANXA5P08758 320 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 TFPTP0C1Z6 253 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 IMPDH2P12268 514 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 HTR1BP28222 390 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 S100A3P33764 101 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 RAD23AP54725 363 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 GP2P55259 537 aaKnown RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 CDK5R2Q13319 367 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 SPIDRQ14159 915 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ZXDCQ2QGD7 858 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 CPZQ66K79 652 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 TPGS1Q6ZTW0 290 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ZNF551Q7Z340 670 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 SLC15A4Q8N697 577 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ZNF461Q8TAF7 563 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ITFG2Q969R8 447 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 CMTM7Q96FZ5 175 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 FCRL1Q96LA6 429 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 BEGAINQ9BUH8 593 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 RMND5AQ9H871 391 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 CRLS1Q9UJA2 301 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 PPT2Q9UMR5 302 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ERVW-1Q9UQF0 538 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 YIPF1Q9Y548 306 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 TBKBP1A7MCY6 615 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ARVCFO00192 962 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 HS6ST1O60243 411 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 OLFM2O95897 454 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 SEMG1P04279 462 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 PFKLP17858 780 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 PRKACGP22612 351 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 NSG1P42857 185 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 MAPK10P53779 464 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 TPD52P55327 224 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 PHEXP78562 749 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 SMAD3P84022 425 aaKnown RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 MTAPQ13126 283 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 PLD1Q13393 1074 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 BFSP2Q13515 415 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ACOX1Q15067 660 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 CTF1Q16619 201 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 SGO1Q5FBB7 561 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms