RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 CHST8Q9H2A9 424 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 ASIC3Q9UHC3 531 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 PCYOX1Q9UHG3 505 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 SLC39A10Q9ULF5 831 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 POLHQ9Y253 713 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 FARSAQ9Y285 508 aaKnown RBP17.63■□□□□ 0.41
PHGDH-204ENST00000469443 MAD1L1Q9Y6D9 718 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 MED13Q9UHV7 2174 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 CDC14CA4D256 554 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 CTAGE9A4FU28 777 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 DNALI1O14645 258 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-204ENST00000469443 C1orf105O95561 183 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 HBQ1P09105 142 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 ATP5DP30049 168 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 CCNFP41002 786 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 BDKRB1P46663 353 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 GNG11P61952 73 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 PTK6Q13882 451 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 DEFB110Q30KQ9 67 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 IZUMO3Q5VZ72 239 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 PAPD7Q5XG87 772 aaKnown RBP17.62■□□□□ 0.41
PHGDH-204ENST00000469443 SYVN1Q86TM6 617 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 LMNTD2Q8IXW0 634 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 SLC7A5P2Q9GIP4 190 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 PCMTD2Q9NV79 361 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 KCNMB2Q9Y691 235 aa17.62■□□□□ 0.41
PHGDH-204ENST00000469443 MDC1Q14676 2089 aaKnown RBP17.61■□□□□ 0.41
PHGDH-204ENST00000469443 E5RI56 91 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 H3BMH7 237 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 ZNF749O43361 778 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 HCRTR1O43613 425 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 RAB40ALP0C0E4 278 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 RPS18P62269 152 aaKnown RBP17.61■□□□□ 0.41
PHGDH-204ENST00000469443 LONRF1Q17RB8 773 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 CNSTQ6PJW8 725 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 PCGF5Q86SE9 256 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 TAX1BP1Q86VP1 789 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 DENND6AQ8IWF6 608 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 FAM20CQ8IXL6 584 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 SYTL1Q8IYJ3 562 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 DNAJC22Q8N4W6 341 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 RAB42Q8N4Z0 105 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 C2orf73Q8N5S3 287 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-204ENST00000469443 ZBTB2Q8N680 514 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 LMNTD1Q8N9Z9 388 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 CALML6Q8TD86 181 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 MAGEC3Q8TD91 643 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 FAM136AQ96C01 138 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 C20orf96Q9NUD7 363 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-204ENST00000469443 GALPQ9UBC7 116 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 RUVBL2Q9Y230 463 aaKnown RBP17.61■□□□□ 0.41
PHGDH-204ENST00000469443 HEMK1Q9Y5R4 338 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-204ENST00000469443 AP1M2Q9Y6Q5 423 aa17.61■□□□□ 0.41
PHGDH-204ENST00000469443 OR2B3O76000 313 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 MATN4O95460 622 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 MAGP20916 626 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 SLC1A2P43004 574 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 PTGIRP43119 386 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 CTBP1Q13363 440 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 UGT8Q16880 541 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 CCSMST1Q4G0I0 132 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 ACSBG2Q5FVE4 666 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 LCN10Q6JVE6 187 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 CREG2Q8IUH2 290 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
PHGDH-204ENST00000469443 HMGCLL1Q8TB92 370 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 CAPZA3Q96KX2 299 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 NAPGQ99747 312 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-204ENST00000469443 DPH2Q9BQC3 489 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-204ENST00000469443 NLNQ9BYT8 704 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 CCDC68Q9H2F9 335 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 FBXO6Q9NRD1 293 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-204ENST00000469443 INTS7Q9NVH2 962 aaKnown RBP17.6■□□□□ 0.41
PHGDH-204ENST00000469443 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-204ENST00000469443 TSR3Q9UJK0 312 aaKnown RBP17.6■□□□□ 0.41
PHGDH-204ENST00000469443 PYCARDQ9ULZ3 195 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 PLCL2Q9UPR0 1127 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 FAM169AQ9Y6X4 670 aa17.6■□□□□ 0.41
PHGDH-204ENST00000469443 SLC28A2O43868 658 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 PRICKLE3O43900 615 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-204ENST00000469443 FKBP9O95302 570 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 PGAM1P18669 254 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 CLCN7P51798 805 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 SF1Q15637 639 aaKnown RBP17.59■□□□□ 0.41
PHGDH-204ENST00000469443 KLHL38Q2WGJ6 581 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 PTCHD3Q3KNS1 767 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 ZNF385CQ66K41 422 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-204ENST00000469443 FAM198BQ6UWH4 519 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 ENDOVQ8N8Q3 282 aaKnown RBP17.59■□□□□ 0.41
PHGDH-204ENST00000469443 DENND1AQ8TEH3 1009 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 SPRTNQ9H040 489 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-204ENST00000469443 SPATA7Q9P0W8 599 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 FBXO5Q9UKT4 447 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 MAN2B2Q9Y2E5 1009 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 KLHL20Q9Y2M5 609 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 SAR1BQ9Y6B6 198 aa17.59■□□□□ 0.41
PHGDH-204ENST00000469443 TNRC6AQ8NDV7 1962 aaKnown RBP17.59■□□□□ 0.41
PHGDH-204ENST00000469443 KRT87PA6NCN2 255 aa17.58■□□□□ 0.4
PHGDH-204ENST00000469443 ZSCAN9O15535 394 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-204ENST00000469443 CAPN1P07384 714 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms