RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PISDQ9UG56 409 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 CIDEBQ9UHD4 219 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 ADAMTS6Q9UKP5 1117 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 MTO1Q9Y2Z2 717 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 PCDHGA3Q9Y5H0 932 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 SNRNP200O75643 2136 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 DSPP15924 2871 aaKnown RBP10.68□□□□□ -0.7
MSH5-212ENST00000467319 A0A1W2PPV9 198 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 GSAPA4D1B5 854 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 A8MU76 341 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 C9orf172C9J069 976 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SLC16A5O15375 505 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 NVLO15381 856 aaKnown RBP10.68□□□□□ -0.7
MSH5-212ENST00000467319 RIPK2O43353 540 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 RASSF9O75901 435 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 TNFSF15O95150 251 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SLC16A8O95907 504 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 JMJD7P0C870 316 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SPRP35270 261 aaPredicted RBP10.68□□□□□ -0.7
MSH5-212ENST00000467319 PPM1FP49593 454 aaPredicted RBP10.68□□□□□ -0.7
MSH5-212ENST00000467319 RAB15P59190 212 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 TUBB4BP68371 445 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 MC2RQ01718 297 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 CYP4F3Q08477 520 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 PRKAA1Q13131 559 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 ARHGAP19Q14CB8 494 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 PHKG1Q16816 387 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SLC5A12Q1EHB4 618 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 CACHD1Q5VU97 1274 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 ANKS6Q68DC2 871 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 ARMC6Q6NXE6 501 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SBSNQ6UWP8 590 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 TRIM73Q86UV7 250 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 PROSER1Q86XN7 944 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 MYO1HQ8N1T3 1032 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 D2HGDHQ8N465 521 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 LMNTD1Q8N9Z9 388 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 ANKRD49Q8WVL7 239 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SLC44A1Q8WWI5 657 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.68□□□□□ -0.7
MSH5-212ENST00000467319 ANKRD7Q92527 254 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 ISL2Q96A47 359 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 TSPAN17Q96FV3 270 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 ZNF578Q96N58 590 aaPredicted RBP10.68□□□□□ -0.7
MSH5-212ENST00000467319 CNTNAP3BQ96NU0 1288 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 DHRS4Q9BTZ2 278 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SLC12A9Q9BXP2 914 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 CNTNAP3Q9BZ76 1288 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 CHRNA10Q9GZZ6 450 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 CAB39LQ9H9S4 337 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 C1GALT1Q9NS00 363 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 THSD1Q9NS62 852 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 OCIAD1Q9NX40 245 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 FOXJ2Q9P0K8 574 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 AKAP7Q9P0M2 348 aaPredicted RBP10.68□□□□□ -0.7
MSH5-212ENST00000467319 IKZF3Q9UKT9 509 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 SLC39A10Q9ULF5 831 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 KLK4Q9Y5K2 254 aa10.68□□□□□ -0.7
MSH5-212ENST00000467319 A0A087WUV0 522 aaPredicted RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 A0A0J9YY10 115 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 EFCAB7A8K855 629 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 PHGDHO43175 533 aaKnown RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 TLX3O43711 291 aaPredicted RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 PRAMEF10O60809 474 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 FKBP9O95302 570 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 ZBTB11O95625 1053 aaPredicted RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 ENO2P09104 434 aaPredicted RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 SLC35E2BP0CK96 405 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 PVRP15151 417 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 ST6GAL1P15907 406 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 STMN1P16949 149 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 IMPA1P29218 277 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 HSD17B2P37059 387 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 MAGEA12P43365 314 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 SEPHS1P49903 392 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 PMS2P54278 862 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 RAB10P61026 200 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 VSNL1P62760 191 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 SH3BP2P78314 561 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 USP10Q14694 798 aaKnown RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 TTC23LQ6PF05 361 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 UBE2R2Q712K3 238 aaPredicted RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 FAM129CQ86XR2 697 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 LRRC56Q8IYG6 542 aaPredicted RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 RAB42Q8N4Z0 105 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 NKAPQ8N5F7 415 aaKnown RBP10.67□□□□□ -0.7
MSH5-212ENST00000467319 ZNF480Q8WV37 535 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 UBXN10Q96LJ8 280 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 TRAPPC9Q96Q05 1148 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 PAFAH2Q99487 392 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 PKP4Q99569 1192 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 DERL2Q9GZP9 239 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 PARVBQ9HBI1 364 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 FBXO8Q9NRD0 319 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 ZNF180Q9UJW8 692 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 PDE10AQ9Y233 779 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 AK5Q9Y6K8 562 aa10.67□□□□□ -0.7
MSH5-212ENST00000467319 SDK2Q58EX2 2172 aa10.66□□□□□ -0.7
MSH5-212ENST00000467319 NPEPPSL1A6NEC2 478 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms