RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PIWIL4Q7Z3Z4 852 aaKnown RBP3.19□□□□□ -1.9
XRN1-206ENST00000467077 CPLX4Q7Z7G2 160 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 ARHGAP12Q8IWW6 846 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 SLC34A3Q8N130 599 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 RASGEF1CQ8N431 466 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 RBM15BQ8NDT2 890 aaKnown RBP3.19□□□□□ -1.9
XRN1-206ENST00000467077 TESK2Q96S53 571 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 SMC4Q9NTJ3 1288 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 IRAK4Q9NWZ3 460 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 MTMR10Q9NXD2 777 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 POLKQ9UBT6 870 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 KCNJ14Q9UNX9 436 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 R3HDM2Q9Y2K5 976 aaKnown RBP3.19□□□□□ -1.9
XRN1-206ENST00000467077 PAPPA2Q9BXP8 1791 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 COL6A3P12111 3177 aa3.19□□□□□ -1.9
XRN1-206ENST00000467077 RBBP6Q7Z6E9 1792 aaKnown RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 A0A1W2PPI3 338 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 WISP2O76076 250 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 STARD3NLO95772 234 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 EIF2S1P05198 315 aaKnown RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 TPOP07202 933 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 MCCP23508 829 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 PSMA4P25789 261 aaKnown RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 SLC6A12P48065 614 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 TFAP4Q01664 338 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 SIM2Q14190 667 aaPredicted RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 KIR2DS3Q14952 304 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 NAB2Q15742 525 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 RAB6CQ53S08 254 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 FAAH2Q6GMR7 532 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 FAM180BQ6P0A1 224 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 PAQR6Q6TCH4 344 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 OLFM4Q6UX06 510 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 PLXDC2Q6UX71 529 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 GLDNQ6ZMI3 551 aaPredicted RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 USP50Q70EL3 339 aaPredicted RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 TSPAN33Q86UF1 283 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 SLC5A8Q8N695 610 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 EMC1Q8N766 993 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 SLC38A9Q8NBW4 561 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 OR8K5Q8NH50 307 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 ARHGEF2Q92974 986 aaKnown RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 SKA1Q96BD8 255 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 C7orf26Q96N11 449 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 SEMA3CQ99985 751 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 TMEM39BQ9GZU3 492 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 RAB6CQ9H0N0 254 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 ZHX3Q9H4I2 956 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 EPB41L5Q9HCM4 733 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 TRPC7Q9HCX4 862 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 EHD2Q9NZN4 543 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 ASIC3Q9UHC3 531 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 RARRES3Q9UL19 164 aa3.18□□□□□ -1.9
XRN1-206ENST00000467077 TMEM184BQ9Y519 407 aaPredicted RBP3.18□□□□□ -1.9
XRN1-206ENST00000467077 COL4A5P29400 1685 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 ABCA7Q8IZY2 2146 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 TDRD15B5MCY1 1934 aaKnown RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 A0A0G2JNG1 304 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 H3BQ06 376 aaPredicted RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 TSHBP01222 138 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 HMBSP08397 361 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 ALDH1B1P30837 517 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 PIK3CAP42336 1068 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 EPS15P42566 896 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 HLCSP50747 726 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 CTSCP53634 463 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 EIF5P55010 431 aaKnown RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 GEMIN4P57678 1058 aaKnown RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 PPARDQ03181 441 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 MBTD1Q05BQ5 628 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 LRMPQ12912 555 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 RAPSNQ13702 412 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 KIR2DS5Q14953 304 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 MED22Q15528 200 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 PWWP2BQ6NUJ5 590 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 NCEH1Q6PIU2 408 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 C1orf122Q6ZSJ8 110 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 TMTC3Q6ZXV5 915 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 TBC1D1Q86TI0 1168 aaPredicted RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 CCDC190Q86UF4 302 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 LONP2Q86WA8 852 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 NBPF5PQ86XG9 351 aaPredicted RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 HACE1Q8IYU2 909 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 TTC5Q8N0Z6 440 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 SLC39A11Q8N1S5 342 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 GBGT1Q8N5D6 347 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 GCSAMQ8N6F7 178 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 RDM1Q8NG50 284 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 TDRD7Q8NHU6 1098 aaKnown RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 ZPLD1Q8TCW7 415 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 PPP4R1Q8TF05 950 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 HDAC2Q92769 488 aaKnown RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 ZKSCAN4Q969J2 545 aaPredicted RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 OXNAD1Q96HP4 312 aaPredicted RBP3.17□□□□□ -1.9
XRN1-206ENST00000467077 C1orf74Q96LT6 269 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 CHST11Q9NPF2 352 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 PLCXD1Q9NUJ7 323 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 TMEM181Q9P2C4 612 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 AASSQ9UDR5 926 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 PIAS3Q9Y6X2 628 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms