RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 GXYLT1Q4G148 440 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 PPP1R15BQ5SWA1 713 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 MARC1Q5VT66 337 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 YOD1Q5VVQ6 348 aaPredicted RBP11.96□□□□□ -0.49
UBR4-210ENST00000466969 ACAD10Q6JQN1 1059 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 C12orf54Q6X4T0 127 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 AMIGO1Q86WK6 493 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 MAPK1IP1LQ8NDC0 245 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 SGMS2Q8NHU3 365 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 ZCCHC2Q9C0B9 1178 aaKnown RBP11.96□□□□□ -0.49
UBR4-210ENST00000466969 ADAM19Q9H013 955 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 NLRC4Q9NPP4 1024 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 EURLQ9NYK6 297 aa11.96□□□□□ -0.49
UBR4-210ENST00000466969 FOXD3Q9UJU5 478 aaPredicted RBP11.96□□□□□ -0.49
UBR4-210ENST00000466969 DDX3XO00571 662 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBR4-210ENST00000466969 HS6ST1O60243 411 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 PDE9AO76083 593 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 ERCC2P18074 760 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 ASCL1P50553 236 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 RPL26P61254 145 aaKnown RBP11.95□□□□□ -0.5
UBR4-210ENST00000466969 DEFA6Q01524 100 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 LRRC63Q05C16 580 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 UBAP2Q5T6F2 1119 aaKnown RBP11.95□□□□□ -0.5
UBR4-210ENST00000466969 ZNF585AQ6P3V2 769 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 TMEM220Q6QAJ8 160 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 ARHGEF18Q6ZSZ5 1173 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 KIF18BQ86Y91 864 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 DNAJC22Q8N4W6 341 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 NPWQ8N729 165 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 RBM41Q96IZ5 413 aaKnown RBP11.95□□□□□ -0.5
UBR4-210ENST00000466969 FERD3LQ96RJ6 166 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 TUBB6Q9BUF5 446 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 TDRD1Q9BXT4 1180 aaKnown RBP11.95□□□□□ -0.5
UBR4-210ENST00000466969 ZNF700Q9H0M5 742 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 NT5MQ9NPB1 228 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 PCDHA7Q9UN72 937 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 RPL26L1Q9UNX3 145 aaKnown RBP11.95□□□□□ -0.5
UBR4-210ENST00000466969 DYSFO75923 2080 aa11.95□□□□□ -0.5
UBR4-210ENST00000466969 A0A1W2PPR1 153 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 NPIPA2E9PIF3 369 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 NPIPA3F8WFD2 350 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 SLC25A12O75746 678 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 PEX11BO96011 259 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 EGR1P18146 543 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 FPR1P21462 350 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 SYT1P21579 422 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 THBS2P35442 1172 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 PRCPP42785 496 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 PMS1P54277 932 aaKnown RBP11.94□□□□□ -0.5
UBR4-210ENST00000466969 BPIFB4P59827 614 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 MESDQ14696 234 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 GRM7Q14831 915 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 CMPK2Q5EBM0 449 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 ADGRF3Q8IZF5 1079 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBR4-210ENST00000466969 TTC29Q8NA56 475 aaPredicted RBP11.94□□□□□ -0.5
UBR4-210ENST00000466969 OR5M9Q8NGP3 310 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 LINC01560Q8TB33 94 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 CPA5Q8WXQ8 436 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 ZMYND19Q96E35 227 aaPredicted RBP11.94□□□□□ -0.5
UBR4-210ENST00000466969 VPS35Q96QK1 796 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 GSX2Q9BZM3 304 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 POLR1EQ9GZS1 481 aaKnown RBP11.94□□□□□ -0.5
UBR4-210ENST00000466969 TFB2MQ9H5Q4 396 aaKnown RBP11.94□□□□□ -0.5
UBR4-210ENST00000466969 PCDH9Q9HC56 1237 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 PNPLA3Q9NST1 481 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 FAM8A1Q9UBU6 413 aa11.94□□□□□ -0.5
UBR4-210ENST00000466969 A0A0J9YY10 115 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 OR2AG2A6NM03 316 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 GABRR3A8MPY1 467 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 NME2P1O60361 137 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 NEURL1O76050 574 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 LSM8O95777 96 aaKnown RBP11.93□□□□□ -0.5
UBR4-210ENST00000466969 SLC4A1P02730 911 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 HEXBP07686 556 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 UGT2B7P16662 529 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 GPD1P21695 349 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 NME2P22392 152 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 ADH7P40394 386 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 AP1B1Q10567 949 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 TNK1Q13470 666 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 HYAL4Q2M3T9 481 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 FAM214AQ32MH5 1076 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 TRIM65Q6PJ69 517 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 SARM1Q6SZW1 724 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 LAPTM4BQ86VI4 370 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 OR52E1Q8NGJ3 308 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 SLCO2A1Q92959 643 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 CEP63Q96MT8 703 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 SH3GL2Q99962 352 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 BEX2Q9BXY8 128 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 KCNK13Q9HB14 408 aa11.93□□□□□ -0.5
UBR4-210ENST00000466969 NFKBIL1Q9UBC1 381 aaPredicted RBP11.93□□□□□ -0.5
UBR4-210ENST00000466969 MTRF1LQ9UGC7 380 aaKnown RBP11.93□□□□□ -0.5
UBR4-210ENST00000466969 RNF223E7ERA6 249 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 PRLP01236 227 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 KRT3P12035 628 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 SOX18P35713 384 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms