RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 LIPT1Q9Y234 373 aa3.48□□□□□ -1.85
CCDC58-203ENST00000466854 RGPD3A6NKT7 1758 aaPredicted RBP3.48□□□□□ -1.85
CCDC58-203ENST00000466854 RGPD4Q7Z3J3 1758 aa3.48□□□□□ -1.85
CCDC58-203ENST00000466854 ERVK-7P63135 1459 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 KIF16BQ96L93 1317 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 KPNA7A9QM74 516 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 L7N2F9 121 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 BMPR1BO00238 502 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 VCYO14598 125 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 TGFB1I1O43294 461 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 LMX1BO60663 402 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 NOL3O60936 208 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 SPAG6O75602 509 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 NKX2-2O95096 273 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 IFNB1P01574 187 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ATP1A1P05023 1023 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 SP1P08047 785 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 HSPA1AP0DMV8 641 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 HSPA1BP0DMV9 641 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PRLRP16471 622 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ZNF182P17025 639 aaPredicted RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 DDX5P17844 614 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ARF4P18085 180 aaPredicted RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 MAOAP21397 527 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PSMA4P25789 261 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 GDI1P31150 447 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PSMB10P40306 273 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 EIF2DP41214 584 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PIP4K2AP48426 406 aaPredicted RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 HSD17B4P51659 736 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 HADHBP55084 474 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 TRA2BP62995 288 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 FOXM1Q08050 763 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 IRF3Q14653 427 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 FILIP1LQ4L180 1135 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ZRANB3Q5FWF4 1079 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 KCNT1Q5JUK3 1230 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ERMARDQ5T6L9 678 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ADALQ6DHV7 355 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 CENPPQ6IPU0 288 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 CAVIN1Q6NZI2 390 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 TMEM154Q6P9G4 183 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 INO80CQ6PI98 192 aaPredicted RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ISLR2Q6UXK2 745 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 GDPD4Q6W3E5 623 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 GBP6Q6ZN66 633 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 SATL1Q86VE3 508 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 DZIP1Q86YF9 867 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 FOXRED2Q8IWF2 684 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 WDR63Q8IWG1 891 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ZNF34Q8IZ26 560 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 HMGCLL1Q8TB92 370 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PSPC1Q8WXF1 523 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 MR1Q95460 341 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 VPS33AQ96AX1 596 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ALG14Q96F25 216 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 SLC41A2Q96JW4 573 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 FER1L6-AS2Q96M78 137 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 HARBI1Q96MB7 349 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PIP5K1AQ99755 562 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 SH3GL2Q99962 352 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 TMEM47Q9BQJ4 181 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PCGF1Q9BSM1 259 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 THUMPD3Q9BV44 507 aaKnown RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 CCDC106Q9BWC9 280 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 CAPS2Q9BXY5 557 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 GCOM2Q9BZD3 368 aaPredicted RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 TRIM7Q9C029 511 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 KCNN2Q9H2S1 579 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 CLSTN2Q9H4D0 955 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ASAH2Q9NR71 780 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ANO10Q9NW15 660 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 NMRK1Q9NWW6 199 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 SUCLA2Q9P2R7 463 aaPredicted RBP3.47□□□□□ -1.85
CCDC58-203ENST00000466854 APPL1Q9UKG1 709 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PADI1Q9ULC6 663 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 LOXL2Q9Y4K0 774 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 CAPN7Q9Y6W3 813 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 PNPLA6Q8IY17 1366 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ABCA3Q99758 1704 aa3.47□□□□□ -1.85
CCDC58-203ENST00000466854 ATP8B3O60423 1300 aa3.46□□□□□ -1.85
CCDC58-203ENST00000466854 TTC41PQ6P2S7 1318 aa3.46□□□□□ -1.85
CCDC58-203ENST00000466854 KDM3AQ9Y4C1 1321 aa3.46□□□□□ -1.85
CCDC58-203ENST00000466854 DISP2A7MBM2 1401 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 PTCH1Q13635 1447 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 DLC1Q96QB1 1528 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 FAM237AA0A1B0GTK4 181 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 GOLGA6L7A0A1B0GV03 622 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 A0A1W2PQM1 296 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 URADA6NGE7 173 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 NPIPB15A6NHN6 443 aaPredicted RBP3.46□□□□□ -1.86
CCDC58-203ENST00000466854 C16orf97H3BN30 126 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 TAF4O00268 1085 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 XPNPEP2O43895 674 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 VEGFDO43915 354 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 DAB1O75553 588 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 PNPP00491 289 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 CGAP01215 116 aa3.46□□□□□ -1.86
CCDC58-203ENST00000466854 RB1P06400 928 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms