RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 SERPINB9P50453 376 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ZNF135P52742 658 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 AQP4P55087 323 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 NCKAP1LP55160 1127 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 BST1Q10588 318 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TRAP1Q12931 704 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 GPS1Q13098 491 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 NAB1Q13506 487 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 KRT81Q14533 505 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 COG2Q14746 738 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 OXA1LQ15070 435 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TMED2Q15363 201 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 PLA1AQ53H76 456 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 PIGGQ5H8A4 983 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MANEALQ5VSG8 457 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 C1orf146Q5VVC0 180 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SLX4IPQ5VYV7 408 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 LIPMQ5VYY2 423 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 CYP20A1Q6UW02 462 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 RAPH1Q70E73 1250 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ARMCX2Q7L311 632 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 NIPA1Q7RTP0 329 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SETD3Q86TU7 594 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 GPR180Q86V85 440 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 DNAAF5Q86Y56 855 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 DZIP1Q86YF9 867 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 CRLF3Q8IUI8 442 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ARHGEF19Q8IW93 802 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 LRRC71Q8N4P6 559 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 XXYLT1Q8NBI6 393 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 REPS2Q8NFH8 660 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 CMASQ8NFW8 434 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 PNPT1Q8TCS8 783 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 SLC2A12Q8TD20 617 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SLC20A1Q8WUM9 679 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 EME1Q96AY2 570 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ZNF689Q96CS4 500 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 KTI12Q96EK9 354 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 PRR11Q96HE9 360 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 AJUBAQ96IF1 538 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 BTN2A3PQ96KV6 586 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 CCDC17Q96LX7 622 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SLITRK1Q96PX8 696 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 PAFAH2Q99487 392 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SERPINI1Q99574 410 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 THTPAQ9BU02 230 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SLC46A2Q9BY10 475 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MROQ9BYG7 248 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TMEM117Q9H0C3 514 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 PRORYQ9H606 182 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ZNF385DQ9H6B1 395 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ACAD9Q9H845 621 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MLXIPLQ9NP71 852 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 UBE2TQ9NPD8 197 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 MRPL40Q9NQ50 206 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 TRIM36Q9NQ86 728 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 FBXO6Q9NRD1 293 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 LIN7CQ9NUP9 197 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 OLAHQ9NV23 265 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SLC38A7Q9NVC3 462 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 FBXO34Q9NWN3 711 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 NYAP2Q9P242 653 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 DNAJB11Q9UBS4 358 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 APPL1Q9UKG1 709 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 CNOT6Q9ULM6 557 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 STX8Q9UNK0 236 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SLC8A2Q9UPR5 921 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 CHMP2BQ9UQN3 213 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 STYXL1Q9Y6J8 313 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MYH7P12883 1935 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 EMSYQ7Z589 1322 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 APCP25054 2843 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 A0A087WXM4 84 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 FAM237BA0A1B0GVD1 139 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TCRBV9S1A1TA0A576 114 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RGSL1A5PLK6 1076 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 FAM159BA6NKW6 160 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 E7ENX8 843 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 H0Y626 953 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 GOLGA8TH3BQL2 631 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 H3BSA7 217 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 I3L4J1 428 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 M0QYG6 137 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 FBP2O00757 339 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TSPAN4O14817 238 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PER2O15055 1255 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 MSH4O15457 936 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 SNAP91O60641 907 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TBCAO75347 108 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 PIAS2O75928 621 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PDE5AO76074 875 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 EPN2O95208 641 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TRIM16O95361 564 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 GCNT3O95395 438 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 LSM8O95777 96 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 MLYCDO95822 493 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 UGT2B4P06133 528 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 POLR2MP0CAP2 368 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 GOLGA8HP0CJ92 632 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CSH1P0DML2 217 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms