RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 PNPLA2Q96AD5 504 aa12□□□□□ -0.49
SOX2-OT-203ENST00000466034 SLC22A18Q96BI1 424 aa12□□□□□ -0.49
SOX2-OT-203ENST00000466034 FER1L6-AS2Q96M78 137 aa12□□□□□ -0.49
SOX2-OT-203ENST00000466034 TSGA10Q9BZW7 698 aa12□□□□□ -0.49
SOX2-OT-203ENST00000466034 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
SOX2-OT-203ENST00000466034 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
SOX2-OT-203ENST00000466034 TXLNGQ9NUQ3 528 aa12□□□□□ -0.49
SOX2-OT-203ENST00000466034 GPN3Q9UHW5 284 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-203ENST00000466034 PLAGL1Q9UM63 463 aa12□□□□□ -0.49
SOX2-OT-203ENST00000466034 ESPL1Q14674 2120 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 PRMT5O14744 637 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 CNOT3O75175 753 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 SLCO2B1O94956 709 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 S1PR4O95977 384 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 APOA4P06727 396 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 CTSBP07858 339 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 AOAHP28039 575 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 OTX2P32243 289 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 FOLR3P41439 243 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 UQCRFS1P47985 274 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 TTPAP49638 278 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 SOX8P57073 446 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 INPP5JQ15735 1006 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 NKAIN1Q4KMZ8 207 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 PCID2Q5JVF3 399 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 C1orf189Q5VU69 101 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 MLIPQ5VWP3 458 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 SLC6A19Q695T7 634 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 DRICH1Q6PGQ1 229 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 C4orf22Q6V702 233 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 GAS2L3Q86XJ1 694 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 VRK3Q8IV63 474 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 MPP5Q8N3R9 675 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 ZNF655Q8N720 491 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 LINC01555Q8NAE3 123 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 PPHLN1Q8NEY8 458 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 OR2L8Q8NGY9 312 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 DENND1AQ8TEH3 1009 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 C1orf54Q8WWF1 131 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 NACC2Q96BF6 587 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 CATSPERZQ9NTU4 200 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 EURLQ9NYK6 297 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 IFT80Q9P2H3 777 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 DHCR7Q9UBM7 475 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 NDOR1Q9UHB4 597 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 ANAPC5Q9UJX4 755 aa11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 PTRH2Q9Y3E5 179 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-203ENST00000466034 ICE1Q9Y2F5 2266 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 NUP210LQ5VU65 1888 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 BLACEA4D250 179 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 A6NL46 340 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 RASGRF2O14827 1237 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 KRT86O43790 486 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 PRICKLE3O43900 615 aaPredicted RBP11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 APRTP07741 180 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 ETS1P14921 441 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 MAGP20916 626 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 CD9P21926 228 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 GNLYP22749 145 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 RPS3P23396 243 aaKnown RBP eCLIP11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 ARSFP54793 590 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 CSE1LP55060 971 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 HSPA14Q0VDF9 509 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 MYBPC3Q14896 1274 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 TMED2Q15363 201 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 SIX1Q15475 284 aaPredicted RBP11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 CCNG2Q16589 344 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 DCAF10Q5QP82 559 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 FHL5Q5TD97 284 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 YOD1Q5VVQ6 348 aaPredicted RBP11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 IGFL3Q6UXB1 125 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 PRUNE1Q86TP1 453 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 LRRC6Q86X45 466 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 CCDC89Q8N998 374 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 FKBP10Q96AY3 582 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 PTERQ96BW5 349 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 ZNF285Q96NJ3 590 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 PANX3Q96QZ0 392 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 NDC1Q9BTX1 674 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 RAB11FIP5Q9BXF6 653 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 P2RY12Q9H244 342 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 SLAMF7Q9NQ25 335 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 TREX1Q9NSU2 369 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 INTS7Q9NVH2 962 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 ZKSCAN5Q9Y2L8 839 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 KLK4Q9Y5K2 254 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
SOX2-OT-203ENST00000466034 HIVEP3Q5T1R4 2406 aa11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 IQCF5A8MTL0 148 aa11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 AP3B1O00203 1094 aa11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 PEX12O00623 359 aa11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 KPNA5O15131 536 aa11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 CD3EAPO15446 510 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 IPO13O94829 963 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 ALBP02768 609 aa11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 UMODP07911 640 aa11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 PIM1P11309 404 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-203ENST00000466034 ITGAXP20702 1163 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms