RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 WBP4O75554 376 aaKnown RBP19.28■□□□□ 0.68
SDF4-205ENST00000465727 CNPP09543 421 aaKnown RBP19.28■□□□□ 0.68
SDF4-205ENST00000465727 PIRTP0C851 137 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 GTF2E2P29084 291 aaKnown RBP19.28■□□□□ 0.68
SDF4-205ENST00000465727 GTF2H3Q13889 308 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 TAF1AQ15573 450 aaPredicted RBP19.28■□□□□ 0.68
SDF4-205ENST00000465727 DDR2Q16832 855 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 FBXO43Q4G163 708 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 TIGD5Q53EQ6 642 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 ALFQ53S48 1182 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 MS4A13Q5J8X5 152 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 ALG1LQ6GMV1 187 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 TTC23LQ6PF05 361 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 MILR1Q7Z6M3 343 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 SYTL1Q8IYJ3 562 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 PHACTR4Q8IZ21 702 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 ASCC1Q8N9N2 400 aaKnown RBP19.28■□□□□ 0.68
SDF4-205ENST00000465727 PIK3R3Q92569 461 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 TRIB3Q96RU7 358 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 TMLHEQ9NVH6 421 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 NLRC5Q86WI3 1866 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 TNFRSF10AO00220 468 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 TNFRSF10BO14763 440 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 DSCR3O14972 297 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 SNAI1O95863 264 aaPredicted RBP19.28■□□□□ 0.68
SDF4-205ENST00000465727 CXCR2P25025 360 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 SYT16Q17RD7 645 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 MLIPQ5VWP3 458 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 SLC46A3Q7Z3Q1 461 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 ADAMTSL2Q86TH1 951 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 LIX1Q8N485 282 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 MYDGFQ969H8 173 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 SLC10A4Q96EP9 437 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 BARD1Q99728 777 aaKnown RBP19.28■□□□□ 0.68
SDF4-205ENST00000465727 COPS4Q9BT78 406 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 CCDC32Q9BV29 185 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 IPPKQ9H8X2 491 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 MARCH7Q9H992 704 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 PLCXD1Q9NUJ7 323 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 GRIP1Q9Y3R0 1128 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 N6AMT1Q9Y5N5 214 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 LTBP3Q9NS15 1303 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 E9PQ18 207 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 HOXC11O43248 304 aaPredicted RBP19.27■□□□□ 0.68
SDF4-205ENST00000465727 NIPSNAP2O75323 286 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 WDR47O94967 919 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 DBTP11182 482 aaKnown RBP19.27■□□□□ 0.68
SDF4-205ENST00000465727 GADD45AP24522 165 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 GNPDA1P46926 289 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 YBEYP58557 167 aaPredicted RBP19.27■□□□□ 0.68
SDF4-205ENST00000465727 TIGD6Q17RP2 521 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 SPANXN2Q5MJ10 180 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 RNF19BQ6ZMZ0 732 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 GLT6D1Q7Z4J2 308 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 P3H2Q8IVL5 708 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 SLC22A15Q8IZD6 547 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 PGBD3Q8N328 593 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 OR4K2Q8NGD2 314 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 DHRS1Q96LJ7 313 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 CEP44Q9C0F1 390 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 PDP1Q9P0J1 537 aaPredicted RBP19.27■□□□□ 0.68
SDF4-205ENST00000465727 ABCG2Q9UNQ0 655 aa19.27■□□□□ 0.68
SDF4-205ENST00000465727 WBP11Q9Y2W2 641 aaKnown RBP19.27■□□□□ 0.68
SDF4-205ENST00000465727 C2orf81A6NN90 581 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 MYO1GB0I1T2 1018 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 E5RI56 91 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 M0R082 166 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 ARVCFO00192 962 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 KMOO15229 486 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 PRAMEF11O60813 436 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 GUCY1B2O75343 617 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 PARNO95453 639 aaKnown RBP19.26■□□□□ 0.67
SDF4-205ENST00000465727 HTR3AP46098 478 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 PGFP49763 221 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 TTLL9Q3SXZ7 439 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 GTDC1Q4AE62 458 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 CTSL3PQ5NE16 218 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 TRIM46Q7Z4K8 759 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 HORMAD1Q86X24 394 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 ZNF784Q8NCA9 323 aaPredicted RBP19.26■□□□□ 0.67
SDF4-205ENST00000465727 OR7G1Q8NGA0 311 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 RASSF5Q8WWW0 418 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 NUAK2Q9H093 628 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 NMUR1Q9HB89 426 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 PCDHGA12O60330 932 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 FABP3P05413 133 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 MAGEA11P43364 429 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 TBX4P57082 545 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 OR2B6P58173 313 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 NPRL3Q12980 569 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 UPP1Q16831 310 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 ATAD3CQ5T2N8 411 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 FAHD1Q6P587 224 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 PAF1Q8N7H5 531 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 SIMC1Q8NDZ2 872 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 SETD6Q8TBK2 473 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 APH1BQ8WW43 257 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 RASSF1Q9NS23 344 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 EHD3Q9NZN3 535 aa19.26■□□□□ 0.67
SDF4-205ENST00000465727 RPS6KA6Q9UK32 745 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms