RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 C9orf172C9J069 976 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 ZBTB14O43829 449 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 PRAMEF10O60809 474 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 TSPAN12O95859 305 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 SYF2O95926 243 aaKnown RBP11.97□□□□□ -0.49
CHPF2-202ENST00000465601 PVRP15151 417 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 MAP4P27816 1152 aaKnown RBP11.97□□□□□ -0.49
CHPF2-202ENST00000465601 SPRP35270 261 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-202ENST00000465601 MLLT3P42568 568 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-202ENST00000465601 ARL4DP49703 201 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 SLC12A2P55011 1212 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 ERVPABLB-1P60509 514 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 POU4F1Q01851 419 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 FOXM1Q08050 763 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 NAB1Q13506 487 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 FASTKQ14296 549 aaKnown RBP11.97□□□□□ -0.49
CHPF2-202ENST00000465601 USP10Q14694 798 aaKnown RBP11.97□□□□□ -0.49
CHPF2-202ENST00000465601 KCNAB1Q14722 419 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 SLMAPQ14BN4 828 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 ANKS6Q68DC2 871 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 LRRC8EQ6NSJ5 796 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 SPESP1Q6UW49 350 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 RASGRP3Q8IV61 690 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 FAM20CQ8IXL6 584 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 MYO1HQ8N1T3 1032 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 RAB42Q8N4Z0 105 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 FLVCR1-AS1Q8TAF5 88 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 DENND1AQ8TEH3 1009 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 DLG3Q92796 817 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 SLC41A2Q96JW4 573 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 CYTH2Q99418 400 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 APMAPQ9HDC9 416 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 C1GALT1Q9NS00 363 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
CHPF2-202ENST00000465601 LNPEPQ9UIQ6 1025 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 ADAMTS6Q9UKP5 1117 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 RAXQ9Y2V3 346 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 B3GALT1Q9Y5Z6 326 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 LAMA5O15230 3695 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 ADAMTS20P59510 1910 aa11.97□□□□□ -0.49
CHPF2-202ENST00000465601 MYO1CO00159 1063 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 NVLO15381 856 aaKnown RBP11.96□□□□□ -0.49
CHPF2-202ENST00000465601 SLU7O95391 586 aaKnown RBP11.96□□□□□ -0.49
CHPF2-202ENST00000465601 ZBTB11O95625 1053 aaPredicted RBP11.96□□□□□ -0.49
CHPF2-202ENST00000465601 EBLN1P0CF75 366 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 MYBL2P10244 700 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 FOLR1P15328 257 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 ST6GAL1P15907 406 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 HSD11B2P80365 405 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 ILF2Q12905 390 aaKnown RBP11.96□□□□□ -0.49
CHPF2-202ENST00000465601 KIR2DS3Q14952 304 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 UAP1Q16222 522 aaPredicted RBP11.96□□□□□ -0.49
CHPF2-202ENST00000465601 CYP2A13Q16696 494 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 TMEM164Q5U3C3 297 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 CLEC14AQ86T13 490 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 PROSER1Q86XN7 944 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 KMT5CQ86Y97 462 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 FBXO15Q8NCQ5 510 aaPredicted RBP11.96□□□□□ -0.49
CHPF2-202ENST00000465601 NAF1Q96HR8 494 aaKnown RBP11.96□□□□□ -0.49
CHPF2-202ENST00000465601 TRAPPC9Q96Q05 1148 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 OR6C1Q96RD1 312 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 GPR22Q99680 433 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 FUT8Q9BYC5 575 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 PITPNM3Q9BZ71 974 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 TWSG1Q9GZX9 223 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 ACSS3Q9H6R3 686 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 ANKZF1Q9H8Y5 726 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 SYTL2Q9HCH5 934 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 GPAMQ9HCL2 828 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 FBXO8Q9NRD0 319 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 SOHLH2Q9NX45 425 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 FOXJ2Q9P0K8 574 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 SPATA7Q9P0W8 599 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 IKZF3Q9UKT9 509 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 ZMIZ1Q9ULJ6 1067 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 PDE10AQ9Y233 779 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 PCDHGA7Q9Y5G6 932 aa11.96□□□□□ -0.49
CHPF2-202ENST00000465601 A0A0J9YY10 115 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 POLR1CO15160 346 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 SLC16A5O15375 505 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 PHGDHO43175 533 aaKnown RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 PRICKLE3O43900 615 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 SLC16A8O95907 504 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 C8GP07360 202 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 ZNF37AP17032 561 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 CYP2A7P20853 494 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 OAS2P29728 719 aaKnown RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 PMS2P54278 862 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 RAB15P59190 212 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 TSTA3Q13630 321 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 SF1Q15637 639 aaKnown RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 ST3GAL2Q16842 350 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 DCAF12Q5T6F0 453 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 MROH9Q5TGP6 573 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 SUSD1Q6UWL2 747 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 CEACAM20Q6UY09 585 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 ZFAND4Q86XD8 727 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 CARFQ8N187 725 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 D2HGDHQ8N465 521 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms