RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PYCARDQ9ULZ3 195 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 POLHQ9Y253 713 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 FARSAQ9Y285 508 aaKnown RBP20.99■□□□□ 0.95
LIME1-203ENST00000465591 TENM4Q6N022 2769 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 GOLGA6L10A0A0M3HER8 536 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 E7EQ34 232 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 RASGRF2O14827 1237 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 KPNA5O15131 536 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 MAP3K7O43318 606 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 PRICKLE3O43900 615 aaPredicted RBP20.98■□□□□ 0.95
LIME1-203ENST00000465591 KDM1AO60341 852 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 RECKO95980 971 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 ESR1P03372 595 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 RPN2P04844 631 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 KLK3P07288 261 aaPredicted RBP20.98■□□□□ 0.95
LIME1-203ENST00000465591 MAGP20916 626 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 CTBP1Q13363 440 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 IZUMO3Q5VZ72 239 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 ZNF470Q6ECI4 717 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 PRICKLE2Q7Z3G6 844 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 PTRH1Q86Y79 214 aaKnown RBP20.98■□□□□ 0.95
LIME1-203ENST00000465591 PPIL6Q8IXY8 311 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 DENND1AQ8TEH3 1009 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 GRK7Q8WTQ7 553 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 SKA2Q8WVK7 121 aaPredicted RBP20.98■□□□□ 0.95
LIME1-203ENST00000465591 ABHD17AQ96GS6 310 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 SLC30A3Q99726 388 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 FAM117AQ9C073 453 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 ZNF71Q9NQZ8 489 aaPredicted RBP20.98■□□□□ 0.95
LIME1-203ENST00000465591 FBXO6Q9NRD1 293 aaPredicted RBP20.98■□□□□ 0.95
LIME1-203ENST00000465591 MED16Q9Y2X0 877 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 PCSK5Q92824 1860 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 ANKRD12Q6UB98 2062 aa20.98■□□□□ 0.95
LIME1-203ENST00000465591 TNRC6AQ8NDV7 1962 aaKnown RBP20.97■□□□□ 0.95
LIME1-203ENST00000465591 MAGEB16A2A368 324 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 J3QKU1 62 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 BANF1O75531 89 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 ZIC2O95409 532 aaPredicted RBP20.97■□□□□ 0.95
LIME1-203ENST00000465591 PKMP14618 531 aaKnown RBP20.97■□□□□ 0.95
LIME1-203ENST00000465591 PTGIRP43119 386 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 RPS15P62841 145 aaKnown RBP20.97■□□□□ 0.95
LIME1-203ENST00000465591 PPP1R7Q15435 360 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 ACSBG2Q5FVE4 666 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 ZNF549Q6P9A3 640 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 ENDOVQ8N8Q3 282 aaKnown RBP20.97■□□□□ 0.95
LIME1-203ENST00000465591 GIMAP7Q8NHV1 300 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 GSDMBQ8TAX9 411 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 SLC39A10Q9ULF5 831 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 MAD1L1Q9Y6D9 718 aa20.97■□□□□ 0.95
LIME1-203ENST00000465591 H3BMM5 538 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 K7EM74 188 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 FANCGO15287 622 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 SUV39H1O43463 412 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 OR2B3O76000 313 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 USP1O94782 785 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 MATN4O95460 622 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 CBSLP0DN79 551 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 TCP1P17987 556 aaKnown RBP20.96■□□□□ 0.95
LIME1-203ENST00000465591 CHRM3P20309 590 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 PSMB5P28074 263 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 CBSP35520 551 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 UGT8Q16880 541 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 FCRL6Q6DN72 434 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 SYVN1Q86TM6 617 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 ZBTB2Q8N680 514 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 C9orf43Q8TAL5 461 aaPredicted RBP20.96■□□□□ 0.95
LIME1-203ENST00000465591 RAD51AP1Q96B01 352 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 CAPZA3Q96KX2 299 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 TRIM55Q9BYV6 548 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 INTS10Q9NVR2 710 aaKnown RBP20.96■□□□□ 0.95
LIME1-203ENST00000465591 HEMK1Q9Y5R4 338 aaPredicted RBP20.96■□□□□ 0.95
LIME1-203ENST00000465591 HEATR5BQ9P2D3 2071 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 NBASA2RRP1 2371 aa20.96■□□□□ 0.95
LIME1-203ENST00000465591 DNALI1O14645 258 aaPredicted RBP20.95■□□□□ 0.94
LIME1-203ENST00000465591 DNAJB5O75953 348 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 RAB40ALP0C0E4 278 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 NR1D1P20393 614 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 IVDP26440 423 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 ATP5DP30049 168 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 SLC1A2P43004 574 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 CLCN7P51798 805 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 MPP1Q00013 466 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 THOC5Q13769 683 aaKnown RBP20.95■□□□□ 0.94
LIME1-203ENST00000465591 PTK6Q13882 451 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 MSS51Q4VC12 460 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.95■□□□□ 0.94
LIME1-203ENST00000465591 C1orf189Q5VU69 101 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 CPZQ66K79 652 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 CREG2Q8IUH2 290 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 GPR135Q8IZ08 494 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 ZNF655Q8N720 491 aaPredicted RBP20.95■□□□□ 0.94
LIME1-203ENST00000465591 ADAMTS17Q8TE56 1095 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 N4BP2L2Q92802 583 aaPredicted RBP20.95■□□□□ 0.94
LIME1-203ENST00000465591 SLCO2A1Q92959 643 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 NLNQ9BYT8 704 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 TRIM4Q9C037 500 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 C20orf96Q9NUD7 363 aaPredicted RBP20.95■□□□□ 0.94
LIME1-203ENST00000465591 ASIC3Q9UHC3 531 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 PCYOX1Q9UHG3 505 aa20.95■□□□□ 0.94
LIME1-203ENST00000465591 MAN2B2Q9Y2E5 1009 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms