RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 OR52A4PA6NMU1 304 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 GFYI3L273 518 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 IFRD1O00458 451 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 BTN3A1O00481 513 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 YKT6O15498 198 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 ANXA6P08133 673 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 TFEBP19484 476 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 KCNC1P48547 511 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 CCT8P50990 548 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 RPE65Q16518 533 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 DEFB133Q30KQ1 61 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 EPGNQ6UW88 154 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 GATAD2AQ86YP4 633 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 SLC22A9Q8IVM8 553 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 NAGSQ8N159 534 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 MINDY1Q8N5J2 469 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 ZNF781Q8N8C0 355 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 C12orf66Q96MD2 445 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 EBF4Q9BQW3 602 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 BTBD10Q9BSF8 475 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 CCDC106Q9BWC9 280 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 TBC1D10AQ9BXI6 508 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 TFB2MQ9H5Q4 396 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 NCKIPSDQ9NZQ3 722 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 ZNF624Q9P2J8 865 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 NCDNQ9UBB6 729 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 ADAMTS6Q9UKP5 1117 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 ADAMTS9Q9P2N4 1935 aa16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 ZFC3H1O60293 1989 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-203ENST00000465229 TP53BP1Q12888 1972 aaPredicted RBP16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 TRBV23OR9-2A0A075B6M9 112 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 NPEPPSL1A6NEC2 478 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 NEMP2A6NFY4 417 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 PROB1E7EW31 1015 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 MATN2O00339 956 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 PSIP1O75475 530 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 ESRRAP11474 423 aaPredicted RBP16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 HALP42357 657 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 RPL14P50914 215 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 ATXN3P54252 364 aaPredicted RBP16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 NAGLUP54802 743 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 OR4D1Q15615 310 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 TSNQ15631 228 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 KIRREL3Q8IZU9 778 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 PHC3Q8NDX5 983 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 MAGEC3Q8TD91 643 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 ZDHHC1Q8WTX9 485 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 PATE1Q8WXA2 126 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 KIAA1191Q96A73 305 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 CNDP1Q96KN2 507 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 ALG9Q9H6U8 611 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 SEMA4GQ9NTN9 838 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 ASF1AQ9Y294 204 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 RALGAPA1Q6GYQ0 2036 aa16.46■□□□□ 0.23
EXOSC3-203ENST00000465229 CCDC189A1A4V9 331 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 HDAC3O15379 428 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 LRP3O75074 770 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 C8GP07360 202 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 TGM1P22735 817 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 SLC19A1P41440 591 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 NFKB2Q00653 900 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 GALNT1Q10472 559 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 SNCBQ16143 134 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 CSRP2Q16527 193 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 ARL13AQ5H913 290 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 CFAP157Q5JU67 520 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 OGFOD3Q6PK18 319 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 SBSNQ6UWP8 590 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 UNC5DQ6UXZ4 953 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 UBE2R2Q712K3 238 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 UTP4Q969X6 686 aaKnown RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 PRR11Q96HE9 360 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 FOPNLQ96NB1 174 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 SLC12A9Q9BXP2 914 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 PARD6AQ9NPB6 346 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 RXFP3Q9NSD7 469 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 IMP3Q9NV31 184 aaKnown RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 PRAMEF33A0A0G2JMD5 474 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 OR5K4A6NMS3 321 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 B4DGG1 531 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 SLC16A5O15375 505 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 FFAR2O15552 330 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 PCDHGA12O60330 932 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 WFS1O76024 890 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 IPO13O94829 963 aaKnown RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 C1orf105O95561 183 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 MTHFD1P11586 935 aaKnown RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 MAPK9P45984 424 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 PHKG1Q16816 387 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 PPP1R3AQ16821 1122 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 DUS1LQ6P1R4 473 aaKnown RBP16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 LSMEM2Q8N112 164 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 SFRP1Q8N474 314 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 OR5AR1Q8NGP9 310 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 RHEBL1Q8TAI7 183 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 STAG3L4Q8TBR4 150 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 SLC37A2Q8TED4 501 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 TRMOQ9BU70 441 aa16.45■□□□□ 0.22
EXOSC3-203ENST00000465229 DNAAF2Q9NVR5 837 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms