RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SLC5A2P31639 672 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 RAB15P59190 212 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 SH3BP2P78314 561 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 HSD11B2P80365 405 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 FOXM1Q08050 763 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 USP10Q14694 798 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 CYP2A13Q16696 494 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 DCAF12Q5T6F0 453 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 UBAP2Q5T6F2 1119 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 ANKS6Q68DC2 871 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 TMEM207Q6UWW9 146 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 PROSER1Q86XN7 944 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 CEP97Q8IW35 865 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 NKAPQ8N5F7 415 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 LMNTD1Q8N9Z9 388 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 FLVCR1-AS1Q8TAF5 88 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 HMGCLL1Q8TB92 370 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 DENND1AQ8TEH3 1009 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 TSPAN17Q96FV3 270 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 PDLIM5Q96HC4 596 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 PKP4Q99569 1192 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 GPR22Q99680 433 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 SLC12A9Q9BXP2 914 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 PITPNM3Q9BZ71 974 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 ASPSCR1Q9BZE9 553 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 ACSS3Q9H6R3 686 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 POPDC3Q9HBV1 291 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 SIDT1Q9NXL6 827 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 APC2O95996 2303 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 ACACAQ13085 2346 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 MAP1BP46821 2468 aaKnown RBP14.02□□□□□ -0.16
SQSTM1-205ENST00000464493 TAF4O00268 1085 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 POLR1CO15160 346 aaPredicted RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 SLC16A5O15375 505 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 MAP3K7O43318 606 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 TLX3O43711 291 aaPredicted RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 PRAMEF10O60809 474 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 SYF2O95926 243 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 FAM153BP0C7A2 387 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 ST6GAL1P15907 406 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 ZNF37AP17032 561 aaPredicted RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 CYP2A7P20853 494 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 PEBP1P30086 187 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 HSD17B2P37059 387 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 SP140Q13342 867 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 ZNF460Q14592 562 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 ARHGAP19Q14CB8 494 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 SLC5A12Q1EHB4 618 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 FAM153CQ494X1 144 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 TMTC4Q5T4D3 741 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 CEACAM20Q6UY09 585 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 TRMT10CQ7L0Y3 403 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 TAX1BP1Q86VP1 789 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 D2HGDHQ8N465 521 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 SNIP1Q8TAD8 396 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 MCOLN3Q8TDD5 553 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 DLG3Q92796 817 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 PMEPA1Q969W9 287 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 MRRFQ96E11 262 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 TRAPPC9Q96Q05 1148 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 OR6C1Q96RD1 312 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 CTRCQ99895 268 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 DDA1Q9BW61 102 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 CAB39LQ9H9S4 337 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 PARVBQ9HBI1 364 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 GPAMQ9HCL2 828 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 SOHLH2Q9NX45 425 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 ADAMTS6Q9UKP5 1117 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 PCDHB11Q9Y5F2 797 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 PCDHGA3Q9Y5H0 932 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 B3GALT1Q9Y5Z6 326 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 LAMA5O15230 3695 aa14.02□□□□□ -0.17
SQSTM1-205ENST00000464493 ZFHX4Q86UP3 3567 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 A0A087WUV0 522 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 A0A0J9YY10 115 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ZNF839A8K0R7 811 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PRICKLE3O43900 615 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 SLC16A8O95907 504 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 HIST1H2AGP0C0S8 130 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 EBLN1P0CF75 366 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ERGP11308 486 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PVRP15151 417 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 FOLR1P15328 257 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 STMN1P16949 149 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 HIST1H2ADP20671 130 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 TNFRSF8P28908 595 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PMS2P54278 862 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PNLIPRP1P54315 467 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PCBP4P57723 403 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ACY1Q03154 408 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 FASTKQ14296 549 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 IL11RAQ14626 422 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 KCNAB1Q14722 419 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 SF1Q15637 639 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 UAP1Q16222 522 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 CYB5D1Q6P9G0 228 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 TRIM73Q86UV7 250 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 GSPT2Q8IYD1 628 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ANKRD7Q92527 254 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms