RNA–Protein interactions for RNA: ENST00000464243.1

CLHC1-210, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 509 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-210ENST00000464243 NR1D2Q14995 579 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 HERC3Q15034 1050 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 SEL1L3Q68CR1 1132 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 CATSPERDQ86XM0 798 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 C11orf45Q8TAV5 145 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 SCFD2Q8WU76 684 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 USP6NLQ92738 828 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 SLC45A3Q96JT2 553 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 PPM1MQ96MI6 270 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 URM1Q9BTM9 101 aaKnown RBP3.41□□□□□ -1.86
CLHC1-210ENST00000464243 HRH4Q9H3N8 390 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 KCNK15Q9H427 330 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 SPHK1Q9NYA1 384 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 HACL1Q9UJ83 578 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 GRIP1Q9Y3R0 1128 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 CSNK1G3Q9Y6M4 447 aa3.41□□□□□ -1.86
CLHC1-210ENST00000464243 B4E171 279 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 FOLR2P14207 255 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 TM4SF1P30408 202 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 GABRA5P31644 462 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 ARL3P36405 182 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 TSPAN7P41732 249 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 TAF10Q12962 218 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 MTF1Q14872 753 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 MTHFSDQ2M296 383 aaKnown RBP3.4□□□□□ -1.87
CLHC1-210ENST00000464243 C15orf32Q32M92 178 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 RNF212Q495C1 297 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 TMPRSS11FQ6ZWK6 438 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 HAUS6Q7Z4H7 955 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 LDB1Q86U70 411 aaPredicted RBP3.4□□□□□ -1.87
CLHC1-210ENST00000464243 MARCH9Q86YJ5 346 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 CDK20Q8IZL9 346 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.4□□□□□ -1.87
CLHC1-210ENST00000464243 OR13C3Q8NGS6 347 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 RAD9AQ99638 391 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 PPANQ9NQ55 473 aaKnown RBP3.4□□□□□ -1.87
CLHC1-210ENST00000464243 TNNQ9UQP3 1299 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 PCDH11YQ9BZA8 1340 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 ZNF541Q9H0D2 1346 aa3.4□□□□□ -1.87
CLHC1-210ENST00000464243 LRRC72A6NJI9 287 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 ENO4A6NNW6 628 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 RTL8CO15255 209 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 IGHEP01854 428 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 HSPA8P11142 646 aaKnown RBP3.39□□□□□ -1.87
CLHC1-210ENST00000464243 SLC2A2P11168 524 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-210ENST00000464243 CDH3P22223 829 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 IL4RP24394 825 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 HLA-FP30511 346 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 SIRPAP78324 504 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 TMF1P82094 1093 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 ZFP36L1Q07352 338 aaKnown RBP3.39□□□□□ -1.87
CLHC1-210ENST00000464243 MAMLD1Q13495 774 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 ELFN2Q5R3F8 820 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 AACSQ86V21 672 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 ABHD12Q8N2K0 398 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 CCDC107Q8WV48 283 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 APOBEC4Q8WW27 367 aaKnown RBP3.39□□□□□ -1.87
CLHC1-210ENST00000464243 PDLIM5Q96HC4 596 aaKnown RBP3.39□□□□□ -1.87
CLHC1-210ENST00000464243 NEK1Q96PY6 1258 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 SERINC1Q9NRX5 453 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 ZNF510Q9Y2H8 683 aa3.39□□□□□ -1.87
CLHC1-210ENST00000464243 PHOX2AO14813 284 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 EPHB6O15197 1021 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 SCGB1D1O95968 90 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 BCL3P20749 454 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 MAPK4P31152 587 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 ACSL1P33121 698 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 GARSP41250 739 aaKnown RBP3.38□□□□□ -1.87
CLHC1-210ENST00000464243 TSFMP43897 325 aaKnown RBP3.38□□□□□ -1.87
CLHC1-210ENST00000464243 EFTUD2Q15029 972 aaKnown RBP eCLIP3.38□□□□□ -1.87
CLHC1-210ENST00000464243 TMCO3Q6UWJ1 677 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 FRRS1Q6ZNA5 592 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 ADGRF2Q8IZF7 708 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 AFAP1Q8N556 730 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 CHPT1Q8WUD6 406 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 SPATC1LQ9H0A9 340 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 AASSQ9UDR5 926 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 PLAGL1Q9UM63 463 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 NME7Q9Y5B8 376 aa3.38□□□□□ -1.87
CLHC1-210ENST00000464243 MYH15Q9Y2K3 1946 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 SHISA7A6NL88 538 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 C2orf81A6NN90 581 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 PRAMEF11O60813 436 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 HOXD4P09016 255 aaPredicted RBP3.37□□□□□ -1.87
CLHC1-210ENST00000464243 THEGLP0DJG4 465 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 VPREB1P12018 145 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 MPP1Q00013 466 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 SETQ01105 290 aaPredicted RBP3.37□□□□□ -1.87
CLHC1-210ENST00000464243 ZNF415Q09FC8 603 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 ODF4Q2M2E3 257 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 LCN1P1Q5VSP4 162 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 HAUS3Q68CZ6 603 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 G2E3Q7L622 706 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 NKX3-1Q99801 234 aaPredicted RBP3.37□□□□□ -1.87
CLHC1-210ENST00000464243 ZNF577Q9BSK1 485 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 MIS12Q9H081 205 aa3.37□□□□□ -1.87
CLHC1-210ENST00000464243 FAM207AQ9NSI2 230 aaPredicted RBP3.37□□□□□ -1.87
CLHC1-210ENST00000464243 CTSZQ9UBR2 303 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms