RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 BRD3Q15059 726 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 FAM214AQ32MH5 1076 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 ZC3H12BQ5HYM0 836 aaKnown RBP13.87□□□□□ -0.19
SMC1A-204ENST00000463684 TCTE1Q5JU00 501 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 COX15Q7KZN9 410 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 SERPINA9Q86WD7 417 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 CLDN19Q8N6F1 224 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 TTC29Q8NA56 475 aaPredicted RBP13.87□□□□□ -0.19
SMC1A-204ENST00000463684 OR5K2Q8NHB8 316 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 DNAJB8Q8NHS0 232 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.87□□□□□ -0.19
SMC1A-204ENST00000463684 HAS2Q92819 552 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 C19orf43Q9BQ61 176 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 APOL2Q9BQE5 337 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 FERMT1Q9BQL6 677 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 CRB3Q9BUF7 120 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMC1A-204ENST00000463684 GBA3Q9H227 469 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 PLA2G3Q9NZ20 509 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 PTGFRNQ9P2B2 879 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 CTSFQ9UBX1 484 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 SH3BGRL2Q9UJC5 107 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 PLAGL1Q9UM63 463 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 AAR2Q9Y312 384 aaKnown RBP13.87□□□□□ -0.19
SMC1A-204ENST00000463684 MRPS2Q9Y399 296 aaKnown RBP13.87□□□□□ -0.19
SMC1A-204ENST00000463684 MAP2K7O14733 419 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 RASAL1O95294 804 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 AP2A1O95782 977 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 TPBGLP0DKB5 382 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 ESRRAP11474 423 aaPredicted RBP13.86□□□□□ -0.19
SMC1A-204ENST00000463684 FDXRP22570 491 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 ACADLP28330 430 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 PBX1P40424 430 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 OR1D4P47884 311 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 CDKN1CP49918 316 aaPredicted RBP13.86□□□□□ -0.19
SMC1A-204ENST00000463684 ZNF140P52738 457 aaPredicted RBP13.86□□□□□ -0.19
SMC1A-204ENST00000463684 SMSP52788 366 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 OCA2Q04671 838 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 PRPSAP1Q14558 356 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 ITPRIPL1Q6GPH6 555 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 SPNS3Q6ZMD2 512 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 FAM20CQ8IXL6 584 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 ZNF295-AS1Q8N0V1 137 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 SUN3Q8TAQ9 357 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 ELMO1Q92556 727 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 SLC22A18Q96BI1 424 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 HAUS1Q96CS2 278 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 QKIQ96PU8 341 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMC1A-204ENST00000463684 INTS7Q9NVH2 962 aaKnown RBP13.86□□□□□ -0.19
SMC1A-204ENST00000463684 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.86□□□□□ -0.19
SMC1A-204ENST00000463684 ABI3Q9P2A4 366 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 KLHL20Q9Y2M5 609 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 AKAP9Q99996 3911 aa13.86□□□□□ -0.19
SMC1A-204ENST00000463684 NSG1A0A0A6YYJ2 146 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 TRBV5-4A0A0C4DH59 114 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 VSTM2BA6NLU5 285 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 QSOX1O00391 747 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 CCL22O00626 93 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 KCNN4O15554 427 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 SPOPO43791 374 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 FTH1P02794 183 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 AGAP20933 346 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 ADRA1AP35348 466 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 NSG1P42857 185 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 UBASH3AP57075 661 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 TPM4P67936 248 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 PLOD1Q02809 727 aaPredicted RBP13.85□□□□□ -0.19
SMC1A-204ENST00000463684 OLIG2Q13516 323 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 TESK1Q15569 626 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 TAZQ16635 292 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 SYTL3Q4VX76 610 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 NDUFAF7Q7L592 441 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 NLRP9Q7RTR0 991 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 METTL27Q8N6F8 245 aaPredicted RBP13.85□□□□□ -0.19
SMC1A-204ENST00000463684 MIEF2Q96C03 454 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 LRRC45Q96CN5 670 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 ZNF304Q9HCX3 659 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 LUC7LQ9NQ29 371 aaKnown RBP13.85□□□□□ -0.19
SMC1A-204ENST00000463684 C3orf18Q9UK00 162 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 HYOU1Q9Y4L1 999 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.85□□□□□ -0.192e-10■■■■■ 29.1
SMC1A-204ENST00000463684 MAU2Q9Y6X3 613 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 CCDC88CQ9P219 2028 aa13.85□□□□□ -0.19
SMC1A-204ENST00000463684 HIVEP1P15822 2718 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 TACC2O95359 2948 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 GOLGA6L22H0YM25 854 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 H7C0C1 242 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 WFS1O76024 890 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 PRR35P0CG20 571 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 MCM3P25205 808 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 PEBP1P30086 187 aaKnown RBP13.84□□□□□ -0.19
SMC1A-204ENST00000463684 GRIA3P42263 894 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 ATP5OP48047 213 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 RAB28P51157 221 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 KLC1Q07866 573 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 TFDP3Q5H9I0 405 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 ATG9BQ674R7 924 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms