RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 GATAD2AQ86YP4 633 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 SLC13A5Q86YT5 568 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 LGI2Q8N0V4 545 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ARHGAP18Q8N392 663 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PRELID2Q8N945 189 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 OR2T3Q8NH03 318 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 TEKT4Q8WW24 435 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 C1orf54Q8WWF1 131 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 GOLGA1Q92805 767 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 FAM136AQ96C01 138 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 LMLNQ96KR4 655 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RNF157Q96PX1 679 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ALS2CR12Q96Q35 445 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 LGMNQ99538 433 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 SEMA3CQ99985 751 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CARD6Q9BX69 1037 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CALN1Q9BXU9 219 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 OSBPL8Q9BZF1 889 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 NACA2Q9H009 215 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 TMEM245Q9H330 911 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ASCL3Q9NQ33 180 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RLIMQ9NVW2 624 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ELOVL2Q9NXB9 296 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 FEZ2Q9UHY8 353 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 STOML2Q9UJZ1 356 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 INTS6Q9UL03 887 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PADI4Q9UM07 663 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 NYNRINQ9P2P1 1898 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 ADAMTS9Q9P2N4 1935 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 IGLV3-10A0A075B6K4 115 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 A0A1W2PPC4 97 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 WDR91A4D1P6 747 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CTAGE9A4FU28 777 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 MIF4GDA9UHW6 222 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 NEDD8-MDP1E9PL57 170 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 F5H423 210 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 H3BUI4 141 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 EEF2KO00418 725 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 KLK10O43240 276 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SNAP91O60641 907 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CST8O60676 142 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SEMA4FO95754 770 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CD160O95971 181 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 ZSCAN5DPP0CG00 497 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 PRKCHP24723 683 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 EPHB2P29323 1055 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CD70P32970 193 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SNX16P57768 344 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 IL9RQ01113 521 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 OTUD4Q01804 1114 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SNX1Q13596 522 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 KRT81Q14533 505 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF234Q14588 700 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 HADHQ16836 314 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 C5orf22Q49AR2 442 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 BRMS1LQ5PSV4 323 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 TMEM215Q68D42 235 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SLC9A4Q6AI14 798 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 FCRLBQ6BAA4 426 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 RWDD4Q6NW29 188 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 LAYNQ6UX15 382 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF782Q6ZMW2 699 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 BBS12Q6ZW61 710 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 PPP1R32Q7Z5V6 425 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 RFX6Q8HWS3 928 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CCDC50Q8IVM0 306 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 APCDD1Q8J025 514 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SYCE1Q8N0S2 351 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 EID2Q8N6I1 236 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 KCTD6Q8NC69 237 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 EXD1Q8NHP7 514 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 ACTL9Q8TC94 416 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 KCNE4Q8WWG9 221 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 ALG14Q96F25 216 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 BTN2A3PQ96KV6 586 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SLC46A1Q96NT5 459 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SLC39A8Q9C0K1 460 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 DDX47Q9H0S4 455 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CARD9Q9H257 536 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 EBF2Q9HAK2 575 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SGK2Q9HBY8 427 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 OLA1Q9NTK5 396 aaKnown RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 PNPOQ9NVS9 261 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 EHD3Q9NZN3 535 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 OR12D3Q9UGF7 316 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CDC23Q9UJX2 597 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 DNPEPQ9ULA0 475 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 SAR1BQ9Y6B6 198 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 V9GYY5 206 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-204ENST00000463622 BOD1L1Q8NFC6 3051 aa3.61□□□□□ -1.83
SCFD1-204ENST00000463622 CREBBPQ92793 2442 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 FLNCQ14315 2725 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 A0A1W2PNU3 283 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 J3KR12 359 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 K7ERQ8 282 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TBL1XO60907 577 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 CHEK2O96017 543 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 F9P00740 461 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms