RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 EVLQ9UI08 416 aaPredicted RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 GNPTGQ9UJJ9 305 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 ZNF225Q9UK10 706 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 PADI4Q9UM07 663 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 PCDHB9Q9Y5E1 797 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 AP4B1Q9Y6B7 739 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 RALGAPA1Q6GYQ0 2036 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 KNL1Q8NG31 2342 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SMIM31A0A1B0GVY4 71 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 A0A1W2PP55 124 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 LRRC72A6NJI9 287 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 AGAP14A8MT82 685 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 NME4O00746 187 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 KHNYNO15037 678 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 BNIP3LO60238 219 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 OR1I1O60431 355 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 POP4O95707 220 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TRBC1P01850 177 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ZCCHC18P0CG32 403 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 BMP2P12643 396 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 MSH3P20585 1137 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SDHBP21912 280 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SLC6A2P23975 617 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 MSX2P35548 267 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ZFP36L2P47974 494 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 RGS4P49798 205 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SNRPD1P62314 119 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 RPS6KA2Q15349 733 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SF3A2Q15428 464 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 FXNQ16595 210 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CDKN3Q16667 212 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 DUOXA1Q1HG43 343 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 RNF220Q5VTB9 566 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 FOXB2Q5VYV0 432 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TTC23LQ6PF05 361 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 LYSMD3Q7Z3D4 306 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SLC15A3Q8IY34 581 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CPNE9Q8IYJ1 553 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 PACRGLQ8N7B6 248 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ANKFN1Q8N957 763 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 FAM156AQ8NDB6 213 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 PHC3Q8NDX5 983 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 OR2AP1Q8NGE2 309 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ZFAND2BQ8WV99 257 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 NCSTNQ92542 709 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 LRRC58Q96CX6 371 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TSC22D3Q99576 134 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 YIPF3Q9GZM5 350 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 PCDHAC1Q9H158 963 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TNKS2Q9H2K2 1166 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CCM2LQ9NUG4 571 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CD274Q9NZQ7 290 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 IL36AQ9UHA7 158 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 PCDHA9Q9Y5H5 950 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 PI4KAP42356 2102 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 A0A1B0GTL3 188 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 FAM234BA2RU67 622 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 EIF3FO00303 357 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 GAPDHSO14556 408 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 RAD51BO15315 384 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 HNRNPRO43390 633 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 LEFTY1O75610 366 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TNFAIP8O95379 198 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 LINC00032P0C843 101 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 GNSP15586 552 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TCN1P20061 433 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CHRM3P20309 590 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ITGALP20701 1170 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 MAOBP27338 520 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 AGTR2P50052 363 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CCNHP51946 323 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SH3BGRP55822 239 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 EEFSECP57772 596 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 KCNK10P57789 538 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TXNL4AP83876 142 aaKnown RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 RALGDSQ12967 914 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CDKL4Q5MAI5 379 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SBSNQ6UWP8 590 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 MACC1Q6ZN28 852 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 TAS2R42Q7RTR8 314 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 DPP10Q8N608 796 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CHST14Q8NCH0 376 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 OR14C36Q8NHC7 312 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 C1orf216Q8TAB5 229 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 UBTD2Q8WUN7 234 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 VOPP1Q96AW1 172 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 BIRC7Q96CA5 298 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 EID2BQ96D98 161 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SLC45A3Q96JT2 553 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 PLEKHG4BQ96PX9 1271 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SMIM14Q96QK8 99 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 OSBPL11Q9BXB4 747 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 CLPBQ9H078 707 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 C6orf106Q9H6K1 298 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms