RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PCDHGA10Q9Y5H3 936 aa19.05■□□□□ 0.64
VARS-221ENST00000463184 PRSS21Q9Y6M0 314 aa19.05■□□□□ 0.64
VARS-221ENST00000463184 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.05■□□□□ 0.64
VARS-221ENST00000463184 ITPR2Q14571 2701 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 GOLGA6L9A6NEM1 432 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 ISM1B1AKI9 464 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 CTSBP07858 339 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 UMODP07911 640 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 TPBGLP0DKB5 382 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 ATXN8OSP0DMR3 200 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 SLC9A5Q14940 896 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 KIR2DS3Q14952 304 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 BRD3Q15059 726 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 PACS1Q6VY07 963 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 ARHGEF18Q6ZSZ5 1173 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 CUZD1Q86UP6 607 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 DENND1AQ8TEH3 1009 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 DLG3Q92796 817 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 LRRC40Q9H9A6 602 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 AGPAT4Q9NRZ5 378 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 ANKRD12Q6UB98 2062 aa19.04■□□□□ 0.64
VARS-221ENST00000463184 SLC5A10A0PJK1 596 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 BHMG1C9JSJ3 638 aaPredicted RBP19.03■□□□□ 0.64
VARS-221ENST00000463184 MASP2O00187 686 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 OR56A5P0C7T3 313 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 PSMA3P25788 255 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 ARSFP54793 590 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 POU6F1Q14863 301 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 RPS6KA1Q15418 735 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 MICALCLQ6ZW33 695 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 ST6GALNAC3Q8NDV1 305 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 WDR77Q9BQA1 342 aaPredicted RBP19.03■□□□□ 0.64
VARS-221ENST00000463184 ZBTB20Q9HC78 741 aaPredicted RBP19.03■□□□□ 0.64
VARS-221ENST00000463184 EURLQ9NYK6 297 aa19.03■□□□□ 0.64
VARS-221ENST00000463184 CCDC78A2IDD5 438 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 MROH6A6NGR9 719 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 ALBP02768 609 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 PIM1P11309 404 aaPredicted RBP19.02■□□□□ 0.64
VARS-221ENST00000463184 ALAS2P22557 587 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 MMP11P24347 488 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 ITGA3P26006 1051 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 MSNP26038 577 aaKnown RBP19.02■□□□□ 0.64
VARS-221ENST00000463184 FOXL2P58012 376 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 SYTL3Q4VX76 610 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 PRAMEF13Q5VWM6 474 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 COG1Q8WTW3 980 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 FKBP10Q96AY3 582 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 SLC22A11Q9NSA0 550 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 PLAGL1Q9UM63 463 aa19.02■□□□□ 0.64
VARS-221ENST00000463184 CRYBG3Q68DQ2 2970 aa19.02■□□□□ 0.63
VARS-221ENST00000463184 CELSR2Q9HCU4 2923 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 F8W8V4 182 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 PSMD3O43242 534 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 KIF5CO60282 957 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 ONECUT2O95948 504 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 PEBP1P30086 187 aaKnown RBP19.01■□□□□ 0.63
VARS-221ENST00000463184 GCGRP47871 477 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 P3H1Q32P28 736 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 OVCH1Q7RTY7 1134 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 MCATQ8IVS2 390 aaKnown RBP19.01■□□□□ 0.63
VARS-221ENST00000463184 PPP4R1Q8TF05 950 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 WDR54Q9H977 334 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 SLC6A20Q9NP91 592 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 NTNG1Q9Y2I2 539 aa19.01■□□□□ 0.63
VARS-221ENST00000463184 A0A1B0GX78 115 aa19■□□□□ 0.63
VARS-221ENST00000463184 USP27XA6NNY8 438 aa19■□□□□ 0.63
VARS-221ENST00000463184 METTL18O95568 372 aa19■□□□□ 0.63
VARS-221ENST00000463184 MAGP20916 626 aa19■□□□□ 0.63
VARS-221ENST00000463184 FOXN2P32314 431 aa19■□□□□ 0.63
VARS-221ENST00000463184 RAB28P51157 221 aa19■□□□□ 0.63
VARS-221ENST00000463184 DNAJC21Q5F1R6 531 aaKnown RBP19■□□□□ 0.63
VARS-221ENST00000463184 AGAP7PQ5VUJ5 663 aa19■□□□□ 0.63
VARS-221ENST00000463184 AADACL2Q6P093 401 aa19■□□□□ 0.63
VARS-221ENST00000463184 IGFL2Q6UWQ7 119 aa19■□□□□ 0.63
VARS-221ENST00000463184 NAPRTQ6XQN6 538 aa19■□□□□ 0.63
VARS-221ENST00000463184 TTLL10Q6ZVT0 673 aa19■□□□□ 0.63
VARS-221ENST00000463184 TICAM1Q8IUC6 712 aa19■□□□□ 0.63
VARS-221ENST00000463184 FAM71DQ8N9W8 422 aa19■□□□□ 0.63
VARS-221ENST00000463184 SLC22A18Q96BI1 424 aa19■□□□□ 0.63
VARS-221ENST00000463184 AGAP4Q96P64 663 aa19■□□□□ 0.63
VARS-221ENST00000463184 TTC1Q99614 292 aa19■□□□□ 0.63
VARS-221ENST00000463184 CDC23Q9UJX2 597 aa19■□□□□ 0.63
VARS-221ENST00000463184 FBXL4Q9UKA2 621 aa19■□□□□ 0.63
VARS-221ENST00000463184 JRKLQ9Y4A0 524 aa19■□□□□ 0.63
VARS-221ENST00000463184 POLEQ07864 2286 aa19■□□□□ 0.63
VARS-221ENST00000463184 CENPEQ02224 2701 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 OR51F1A6NGY5 319 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 PKLRP30613 574 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 SEL1L2Q5TEA6 688 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 IRAK1BP1Q5VVH5 260 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 YOD1Q5VVQ6 348 aaPredicted RBP18.99■□□□□ 0.63
VARS-221ENST00000463184 LINC00523Q86TU6 105 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 KCNMB4Q86W47 210 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 TMEM151BQ8IW70 566 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 SLC34A3Q8N130 599 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 DNAJB14Q8TBM8 379 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 VPS50Q96JG6 964 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 SLC26A1Q9H2B4 701 aa18.99■□□□□ 0.63
VARS-221ENST00000463184 MRM3Q9HC36 420 aaKnown RBP18.99■□□□□ 0.63
VARS-221ENST00000463184 INTS7Q9NVH2 962 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms