RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 TRIM56Q9BRZ2 755 aaKnown RBP10.72□□□□□ -0.69
PTPN7-204ENST00000462815 WDR54Q9H977 334 aa10.72□□□□□ -0.69
PTPN7-204ENST00000462815 ATP13A2Q9NQ11 1180 aa10.72□□□□□ -0.69
PTPN7-204ENST00000462815 PIH1D1Q9NWS0 290 aaKnown RBP10.72□□□□□ -0.69
PTPN7-204ENST00000462815 POLG2Q9UHN1 485 aa10.72□□□□□ -0.69
PTPN7-204ENST00000462815 GPN3Q9UHW5 284 aaPredicted RBP10.72□□□□□ -0.69
PTPN7-204ENST00000462815 KLHL20Q9Y2M5 609 aa10.72□□□□□ -0.69
PTPN7-204ENST00000462815 ANKRD12Q6UB98 2062 aa10.72□□□□□ -0.69
PTPN7-204ENST00000462815 A0A1B0GX78 115 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 FITM1A5D6W6 292 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 VSTM2BA6NLU5 285 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 AKR1B15C9JRZ8 316 aaPredicted RBP10.71□□□□□ -0.69
PTPN7-204ENST00000462815 MAP3K7O43318 606 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 PRICKLE3O43900 615 aaPredicted RBP10.71□□□□□ -0.69
PTPN7-204ENST00000462815 OR1I1O60431 355 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 KLHL41O60662 606 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 ALBP02768 609 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 CTNNA2P26232 953 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 CCR7P32248 378 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 GLRBP48167 497 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 GDF10P55107 478 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 POU6F1Q14863 301 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 BRD3Q15059 726 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 PARP6Q2NL67 630 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 ZNF324BQ6AW86 544 aaPredicted RBP10.71□□□□□ -0.69
PTPN7-204ENST00000462815 DARS2Q6PI48 645 aaKnown RBP10.71□□□□□ -0.69
PTPN7-204ENST00000462815 TAS2R42Q7RTR8 314 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 SLC22A15Q8IZD6 547 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 LRRC57Q8N9N7 239 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 GRHL3Q8TE85 626 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 TM9SF4Q92544 642 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 ELMO1Q92556 727 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 PPP1R2P1Q96PQ5 205 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 SLX1AQ9BQ83 275 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 GRPEL1Q9HAV7 217 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 SMARCAL1Q9NZC9 954 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 CTSFQ9UBX1 484 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTPN7-204ENST00000462815 REXO2Q9Y3B8 237 aaKnown RBP10.71□□□□□ -0.69
PTPN7-204ENST00000462815 PCDHA13Q9Y5I0 950 aa10.71□□□□□ -0.69
PTPN7-204ENST00000462815 CCDC78A2IDD5 438 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 CCDC162PA2VCL2 907 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 DSCR3O14972 297 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 GPC4O75487 556 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 FTH1P02794 183 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 ATXN8OSP0DMR3 200 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 EDN3P14138 238 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 POU3F2P20265 443 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 MCM3P25205 808 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 MSNP26038 577 aaKnown RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 RAB28P51157 221 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 TDGF1P3P51864 188 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 ACVR1Q04771 509 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 KLF1Q13351 362 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 SEMA3AQ14563 771 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 ZRSR2Q15696 482 aaKnown RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 CYP2A13Q16696 494 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 B3GNTL1Q67FW5 361 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 TTLL10Q6ZVT0 673 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 ZNF534Q76KX8 674 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 MCATQ8IVS2 390 aaKnown RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 OR11G2Q8NGC1 345 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 N4BP2L2Q92802 583 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 NDC1Q9BTX1 674 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 LRRC40Q9H9A6 602 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 LUC7LQ9NQ29 371 aaKnown RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 TXLNGQ9NUQ3 528 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 R3HDM2Q9Y2K5 976 aaKnown RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 TDRKHQ9Y2W6 561 aaKnown RBP10.7□□□□□ -0.7
PTPN7-204ENST00000462815 KLK4Q9Y5K2 254 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 DUSP10Q9Y6W6 482 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 SVILO95425 2214 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 NF1P21359 2839 aa10.7□□□□□ -0.7
PTPN7-204ENST00000462815 ZGRF1Q86YA3 2104 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 MACROD2A1Z1Q3 448 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 ISM1B1AKI9 464 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 QSOX1O00391 747 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 LRRTM2O43300 516 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 NRP2O60462 931 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 CTSVO60911 334 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 STSP08842 583 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 TPM1P09493 284 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 ITGA3P26006 1051 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 PLOD1Q02809 727 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-204ENST00000462815 ZNF169Q14929 603 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-204ENST00000462815 CCDC38Q502W7 563 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 DNAJC21Q5F1R6 531 aaKnown RBP10.69□□□□□ -0.7
PTPN7-204ENST00000462815 ZNF449Q6P9G9 518 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 HOOK3Q86VS8 718 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 TMTC1Q8IUR5 882 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 SLC34A3Q8N130 599 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 FAM71DQ8N9W8 422 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 SLC35B2Q8TB61 432 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 FAR1Q8WVX9 515 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 DLG3Q92796 817 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 ZNF778Q96MU6 729 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 IL17FQ96PD4 163 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 SYNPO2LQ9H987 977 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 AGPAT4Q9NRZ5 378 aa10.69□□□□□ -0.7
PTPN7-204ENST00000462815 CUTCQ9NTM9 273 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms