RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 DENND2CQ68D51 928 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CAPRIN2Q6IMN6 1127 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 IYDQ6PHW0 289 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 PPP1R21Q6ZMI0 780 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CENPUQ71F23 418 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 B3GNT8Q7Z7M8 397 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 LRRTM4Q86VH4 590 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 SERPINA9Q86WD7 417 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 GATAD2AQ86YP4 633 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ARL10Q8N8L6 244 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 DNAAF3Q8N9W5 541 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 BBOF1Q8ND07 529 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 OR2L2Q8NH16 312 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 OR4L1Q8NH43 312 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 FBXO25Q8TCJ0 367 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 LPGAT1Q92604 370 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 HDAC10Q969S8 669 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 TRIM44Q96DX7 344 aaPredicted RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 RCC1LQ96I51 464 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 APOLD1Q96LR9 279 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CAMK1GQ96NX5 476 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 GTPBP2Q9BX10 602 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 TXLNGYQ9BZA5 131 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 OR2AG1Q9H205 316 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 OR52A5Q9H2C5 316 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ASB8Q9H765 288 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 EPB41L5Q9HCM4 733 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 SPATS2LQ9NUQ6 558 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 TAAR2Q9P1P5 351 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 SEMA5BQ9P283 1151 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 MARCH4Q9P2E8 410 aaPredicted RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 PDP2Q9P2J9 529 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 KLHL42Q9P2K6 505 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 FBLN5Q9UBX5 448 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ASIC3Q9UHC3 531 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 TMEM98Q9Y2Y6 226 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 KMT2BQ9UMN6 2715 aaPredicted RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 MDC1Q14676 2089 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 PTPRQQ9UMZ3 2332 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CACNA1GO43497 2377 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 KIR2DS5A0A0G2JLQ3 304 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 A0A0G2JNG1 304 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 SLC5A10A0PJK1 596 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 MGAT4DA6NG13 374 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 OR51F1A6NGY5 319 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 LILRA5A6NI73 299 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 OR5K4A6NMS3 321 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 EFCAB8A8MWE9 144 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 KIR2DS3K7RE56 304 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 QSOX1O00391 747 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 PRICKLE3O43900 615 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 SDC3O75056 442 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 MTX2O75431 263 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 URI1O94763 535 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 CDK14O94921 469 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 SLCO2B1O94956 709 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 WISP3O95389 354 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 RECKO95980 971 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 PRSS56P0CW18 603 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 F3P13726 295 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 ATP1B2P14415 290 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 PGAM1P18669 254 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 XRCC1P18887 633 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 AK4P27144 223 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 ACADLP28330 430 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 GABRB3P28472 473 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 TNFRSF8P28908 595 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 ATP5DP30049 168 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 GPR3P46089 330 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 ID4P47928 161 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 LEPRP48357 1165 aaKnown RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 TTPAP49638 278 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 VPS41P49754 854 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 PDX1P52945 283 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 ATXN3P54252 364 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 SESN2P58004 480 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 IL9RQ01113 521 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 CAV1Q03135 178 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 ILF3Q12906 894 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS36-202ENST00000462289 SLC9A5Q14940 896 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 KIR2DS5Q14953 304 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 FASTKD3Q14CZ7 662 aaKnown RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 RTP5Q14D33 572 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 TRIP6Q15654 476 aaKnown RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 UAP1L1Q3KQV9 507 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 SPATS1Q496A3 300 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 C14orf28Q4W4Y0 310 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 AARS2Q5JTZ9 985 aaKnown RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 SPANXN3Q5MJ09 141 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 ALS2CLQ60I27 953 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 CCDC81Q6ZN84 652 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 FAM83HQ6ZRV2 1179 aaPredicted RBP5.61□□□□□ -1.51
VPS36-202ENST00000462289 KIAA0408Q6ZU52 694 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 LRRC6Q86X45 466 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 GKN2Q86XP6 184 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 GALNT13Q8IUC8 556 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 SFTPA2Q8IWL1 248 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 KLHL7Q8IXQ5 586 aa5.61□□□□□ -1.51
VPS36-202ENST00000462289 ARHGEF39Q8N4T4 335 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms