RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MTUS1Q9ULD2 1270 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 TEX13DA0A0J9YY54 714 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 A0A0U1RQK1 487 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF320A2RRD8 509 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 C5orf52A6NGY3 159 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 DUXAA6NLW8 204 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 H0YAE9 185 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 SLC33A1O00400 549 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 PLOD2O00469 737 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ARPC2O15144 300 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 PRKNO60260 465 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 CTSVO60911 334 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 NTN1O95631 604 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 FAM58BPP0C7Q3 252 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 TGFB3P10600 412 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 CETPP11597 493 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 GNAZP19086 355 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 CYP11B2P19099 503 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 DGKAP23743 735 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 MPZP25189 248 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 MNDAP41218 407 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 RGS7P49802 495 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 THOP1P52888 689 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 DVL1P1P54792 670 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 YWHAHQ04917 246 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 MBTD1Q05BQ5 628 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ILF2Q12905 390 aaKnown RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 DMP1Q13316 513 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 SLMAPQ14BN4 828 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 CCDC6Q16204 474 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 PHKG1Q16816 387 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 C2orf76Q3KRA6 126 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 MCMDC2Q4G0Z9 681 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ANKRD20A4Q4UJ75 823 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ANKRD20A8PQ5CZ79 823 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ZRANB3Q5FWF4 1079 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ANKRD20A2Q5SQ80 823 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ANKRD20A1Q5TYW2 823 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ANKRD20A3Q5VUR7 823 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 RAD9BQ6WBX8 426 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 FOXL2NBQ6ZUU3 175 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 KCTD8Q6ZWB6 473 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 NUP54Q7Z3B4 507 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ARHGAP22Q7Z5H3 698 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 RBM23Q86U06 439 aaKnown RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 HOOK3Q86VS8 718 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ZDHHC17Q8IUH5 632 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 PLD3Q8IV08 490 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 SIAH3Q8IW03 269 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ARHGAP24Q8N264 748 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 C10orf53Q8N6V4 93 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 FIBINQ8TAL6 211 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 SORCS1Q8WY21 1168 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 IRGQQ8WZA9 623 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 PROX1Q92786 737 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 AK8Q96MA6 479 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 C17orf77Q96MU5 243 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 SPATA33Q96N06 139 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 GPATCH1Q9BRR8 931 aaKnown RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 C1QTNF4Q9BXJ3 329 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 FUT8Q9BYC5 575 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 PITPNM3Q9BZ71 974 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 HIPK2Q9H2X6 1198 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 TRPV4Q9HBA0 871 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 Q9N2K0 584 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 GSN-AS1Q9NRJ2 163 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 FGF21Q9NSA1 209 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ECHDC1Q9NTX5 307 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF701Q9NV72 531 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 FAM118AQ9NWS6 357 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 B3GAT1Q9P2W7 334 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 DNAJB9Q9UBS3 223 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 LRWD1Q9UFC0 647 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 ARMCX3Q9UH62 379 aaPredicted RBP2.84□□□□□ -1.95
HDAC6-212ENST00000461608 PCDHGB1Q9Y5G3 927 aa2.84□□□□□ -1.95
HDAC6-212ENST00000461608 IGSF1Q8N6C5 1336 aa2.84□□□□□ -1.96
HDAC6-212ENST00000461608 PCDH11YQ9BZA8 1340 aa2.84□□□□□ -1.96
HDAC6-212ENST00000461608 C5orf60A6NFR6 353 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 SERINC4A6NH21 518 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 SMTNL1A8MU46 457 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 C16orf97H3BN30 126 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 TULP2O00295 520 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 CAPN9O14815 690 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 XPNPEP2O43895 674 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 PRKRAO75569 313 aaKnown RBP2.83□□□□□ -1.96
HDAC6-212ENST00000461608 RPS6KA5O75582 802 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 ACSL3O95573 720 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 PPP1R3DO95685 299 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 RLN1P04808 185 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 HSPA8P11142 646 aaKnown RBP2.83□□□□□ -1.96
HDAC6-212ENST00000461608 AMD1P17707 334 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 TIA1P31483 386 aaKnown RBP eCLIP2.83□□□□□ -1.96
HDAC6-212ENST00000461608 WNT5AP41221 380 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 PRKCIP41743 596 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 GAS1P54826 345 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 SNU13P55769 128 aaKnown RBP2.83□□□□□ -1.96
HDAC6-212ENST00000461608 CLDN15P56746 228 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 NANOS2P60321 138 aaKnown RBP2.83□□□□□ -1.96
HDAC6-212ENST00000461608 STX1BP61266 288 aa2.83□□□□□ -1.96
HDAC6-212ENST00000461608 HERV-K104P61576 105 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms