RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 COX11Q9Y6N1 276 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 GON4LQ3T8J9 2241 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NBEAQ8NFP9 2946 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 TCRBV5S1A1TA0A578 114 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PIPSLA2A3N6 862 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 BOLA2-SMG1P6H3BVE0 249 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 MASP2O00187 686 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 HOXC11O43248 304 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SNX2O60749 519 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PFDN1O60925 122 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SRGAP2O75044 1071 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NDUFA10O95299 355 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 ATP6V1G2O95670 118 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 OLFM2O95897 454 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 TRUB2O95900 331 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 VIPP01282 170 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 CD38P28907 300 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 HNRNPH3P31942 346 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 CSTF2P33240 577 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 ATP5C1P36542 298 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 AVPR1AP37288 418 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NSFP46459 744 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SULT1E1P49888 294 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PEX5P50542 639 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PRKAG1P54619 331 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 GALCP54803 685 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 YWHAZP63104 245 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC7A9P82251 487 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NME3Q13232 169 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 RASA2Q15283 850 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF77Q15935 545 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PDCD4Q53EL6 469 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SMUG1Q53HV7 270 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 KAZNQ674X7 775 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 TXNRD3NBQ6F5E7 133 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NADSYN1Q6IA69 706 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 TMEM53Q6P2H8 277 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 RFWD3Q6PCD5 774 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 TMEM108Q6UXF1 575 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 C1orf122Q6ZSJ8 110 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 TPGS1Q6ZTW0 290 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 HOOK3Q86VS8 718 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 TMEM25Q86YD3 366 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PHF13Q86YI8 300 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 RHOT2Q8IXI1 618 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NDUFAF2Q8N183 169 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PYROXD2Q8N2H3 581 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 ARFGAP1Q8N6T3 406 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 DNAJB14Q8TBM8 379 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 CSGALNACT1Q8TDX6 532 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 RNF139Q8WU17 664 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SDCCAG3Q96C92 435 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 VMP1Q96GC9 406 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 HSFY1Q96LI6 401 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 COG8Q96MW5 612 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 CATSPER2Q96P56 530 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 MCEEQ96PE7 176 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NDNQ99608 321 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 EDEM3Q9BZQ6 932 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC7A5P2Q9GIP4 190 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 THAP2Q9H0W7 228 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 FBXO44Q9H4M3 255 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM124BQ9H5Z6 455 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 NOD2Q9HC29 1040 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 ZFP14Q9HCL3 533 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 CNGB3Q9NQW8 809 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 PIGVQ9NUD9 493 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 C2orf42Q9NWW7 574 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 DCAF16Q9NXF7 216 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 GDE1Q9NZC3 331 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 CNOT8Q9UFF9 292 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 MTF2Q9Y483 593 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 COMMD3-BMI1R4GMX3 469 aa4.79□□□□□ -1.64
ATPAF1-203ENST00000460928 COL4A2P08572 1712 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 IQANK1A0A1B0GTG1 560 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 A6NLC8 198 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 USP27XA6NNY8 438 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 E7ENX8 843 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM72CH0Y354 149 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 H0Y3Z8 333 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 M0QYT0 321 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CAPN9O14815 690 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CD3EAPO15446 510 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 PI15O43692 258 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DAB1O75553 588 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 URI1O94763 535 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 SUN1O94901 812 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 LSM8O95777 96 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 SYF2O95926 243 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 HKR1P10072 659 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 RALAP11233 206 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 JUPP14923 745 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ITGALP20701 1170 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 IL4RP24394 825 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 LMO1P25800 156 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CORO1AP31146 461 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 GJC1P36383 396 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms