RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MFN1Q8IWA4 741 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 CCAR2Q8N163 923 aaKnown RBP3.13□□□□□ -1.91
RFC4-211ENST00000460408 BMPERQ8N8U9 685 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 IQUBQ8NA54 791 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 DMBX1Q8NFW5 382 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 SIPA1Q96FS4 1042 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 OTUB1Q96FW1 271 aaPredicted RBP3.13□□□□□ -1.91
RFC4-211ENST00000460408 RMDN2Q96LZ7 410 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 Q9H8V8 135 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 A4GALTQ9NPC4 353 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 STK26Q9P289 416 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 SLC7A7Q9UM01 511 aa3.13□□□□□ -1.91
RFC4-211ENST00000460408 FAF1Q9UNN5 650 aaPredicted RBP3.13□□□□□ -1.91
RFC4-211ENST00000460408 PCF11O94913 1555 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 A0A1W2PN81 502 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 FAM172BPA6NC97 362 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 TBCAO75347 108 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 SIX3O95343 332 aaPredicted RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 ATP1A1P05023 1023 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 INHBAP08476 426 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 HSPA8P11142 646 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 LIFP15018 202 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 EPCAMP16422 314 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 EEF1B2P24534 225 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 AZGP1P25311 298 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 CDC25CP30307 473 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 CHRNA7P36544 502 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 PDX1P52945 283 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 UBASH3AP57075 661 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 HILS1P60008 231 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 PPARDQ03181 441 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 LGALS3BPQ08380 585 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ZNF415Q09FC8 603 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 CUL3Q13618 768 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 RBBP5Q15291 538 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 ITPRIPL2Q3MIP1 535 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 UGT3A2Q3SY77 523 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ZC2HC1CQ53FD0 456 aaPredicted RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 DCAF10Q5QP82 559 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 HECTD3Q5T447 861 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 GDPD4Q6W3E5 623 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 MARK2Q7KZI7 788 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 ARHGAP22Q7Z5H3 698 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ABI3BPQ7Z7G0 1075 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ZNF554Q86TJ5 538 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 TMEM139Q8IV31 216 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 CFAP206Q8IYR0 622 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ZNF843Q8N446 348 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ZNF611Q8N823 705 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 MAPKAPK5-AS1Q8N8E1 139 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 THAP8Q8NA92 274 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 OR11H4Q8NGC9 324 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 OR1J1Q8NGS3 322 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 OCC1Q8TAD7 63 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 CCDC107Q8WV48 283 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 FCAMRQ8WWV6 532 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 DOCK7Q96N67 2140 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 FNBP1Q96RU3 617 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 MGME1Q9BQP7 344 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ADPGKQ9BRR6 497 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 TRAF4Q9BUZ4 470 aaPredicted RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 LAT2Q9GZY6 243 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 DNAJC4Q9NNZ3 241 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 GKN1Q9NS71 199 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 COQ3Q9NZJ6 369 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 DAPK2Q9UIK4 370 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 ERRFI1Q9UJM3 462 aaPredicted RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 CPSF3Q9UKF6 684 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 JRKLQ9Y4A0 524 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 TRIM17Q9Y577 477 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 URB2Q14146 1524 aaKnown RBP3.12□□□□□ -1.91
RFC4-211ENST00000460408 FLT1P17948 1338 aa3.12□□□□□ -1.91
RFC4-211ENST00000460408 A0A087WYN8 130 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 PLOD2O00469 737 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 AP5Z1O43299 807 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 FGF17O60258 216 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 PIGNO95427 931 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 NR3C1P04150 777 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 FRMD6-AS1P0C7T7 363 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 SAGP10523 405 aaPredicted RBP3.11□□□□□ -1.91
RFC4-211ENST00000460408 TCF4P15884 667 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 ADRA2CP18825 462 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 CA4P22748 312 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 TIMP3P35625 211 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 NAGLUP54802 743 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 IRX6P78412 446 aaPredicted RBP3.11□□□□□ -1.91
RFC4-211ENST00000460408 RBP5P82980 135 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 NPTX1Q15818 432 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 ALDH1L2Q3SY69 923 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 CCDC184Q52MB2 194 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 CAVIN1Q6NZI2 390 aaKnown RBP3.11□□□□□ -1.91
RFC4-211ENST00000460408 ADCK2Q7Z695 626 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 ZNF329Q86UD4 541 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 NR2C2APQ86WQ0 139 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 METTL23Q86XA0 190 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 ANKRD13CQ8N6S4 541 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 SENP5Q96HI0 755 aaPredicted RBP3.11□□□□□ -1.91
RFC4-211ENST00000460408 SPATA33Q96N06 139 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 SPAG5Q96R06 1193 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms