RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CREB5Q02930 508 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 IZUMO1Q8IYV9 350 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 POMGNT2Q8NAT1 580 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 FAR1Q8WVX9 515 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 IGSF8Q969P0 613 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 RANBP9Q96S59 729 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 CLEC4MQ9H2X3 399 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 A0A1W2PRB8 838 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 FAM86C2PA6NEL3 165 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 SAGE2PA6NJ88 616 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 TRIM32Q13049 653 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 HKDC1Q2TB90 917 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 ARSIQ5FYB1 569 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 SPANXN4Q5MJ08 99 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 CXXC5Q7LFL8 322 aaKnown RBP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 FAM220AQ7Z4H9 259 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 CMTM8Q8IZV2 173 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 OR14C36Q8NHC7 312 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 WFIKKN2Q8TEU8 576 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 ZSCAN5AQ9BUG6 496 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 TMED5Q9Y3A6 229 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 CYP11A1P05108 521 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 MAGP20916 626 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 LGALS3BPQ08380 585 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 LARS2Q15031 903 aaKnown RBP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 ATP13A5Q4VNC0 1218 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 Q6ZVU0 165 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 SLC9A6Q92581 669 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 HTRA1Q92743 480 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 COLEC10Q9Y6Z7 277 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 TAF4O00268 1085 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 CNMDO75829 334 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 LAMP2P13473 410 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 GJA1P17302 382 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 SEPHS1P49903 392 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 AGTR2P50052 363 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 SLBPQ14493 270 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 PTCHD3Q3KNS1 767 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 C6orf136Q5SQH8 315 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 OGFOD2Q6N063 350 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 AMZ2Q86W34 360 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 FLRT1Q9NZU1 646 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 WBP11Q9Y2W2 641 aaKnown RBP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 ZCWPW2A0A1B0GU75 182 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 CMPK1P30085 196 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 DNAJA1P31689 397 aaKnown RBP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 PPP1R8Q12972 351 aaKnown RBP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 LDLRAD1Q5T700 205 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 FAM131AQ6UXB0 335 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 GJD3Q8N144 294 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 KLHL23Q8NBE8 558 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 FCGR1BQ92637 280 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 EZH1Q92800 747 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 ZBED6CLQ96FA7 236 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-205ENST00000460170 ZNF382Q96SR6 550 aa14.44□□□□□ -0.1
PTPRU-205ENST00000460170 MYH7BA7E2Y1 1941 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PDPK1O15530 556 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 NME6O75414 186 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 ATP12AP54707 1039 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 SEMA3AQ14563 771 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 NDUFAF6Q330K2 333 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PIK3R6Q5UE93 754 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 LRRC66Q68CR7 880 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 OR2T5Q6IEZ7 315 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CHST15Q7LFX5 561 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 C1orf52Q8N6N3 182 aaKnown RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 OR2T29Q8NH02 315 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 SPACA7Q96KW9 195 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 DHRS7Q9Y394 339 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 SESN1Q9Y6P5 492 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 NDUFB5O43674 189 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 IFNGP01579 166 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 ALDH4A1P30038 563 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 STAT5AP42229 794 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PLA2G16P53816 162 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PRR5P85299 388 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 ABHD18Q0P651 414 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 UNC50Q53HI1 259 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 IPCEF1Q8WWN9 437 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PTPN18Q99952 460 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 OSER1Q9NX31 292 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CMTM6Q9NX76 183 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 MRPL39Q9NYK5 338 aaKnown RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PTBP2Q9UKA9 531 aaKnown RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 FZD4Q9ULV1 537 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 RNF11Q9Y3C5 154 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 MEIS3P2A8K0S8 358 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 ZNF12P17014 697 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 FMO3P31513 532 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CEACAM7Q14002 265 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CCNIQ14094 377 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 HDDC2Q7Z4H3 204 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PARGQ86W56 976 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 BRINP2Q9C0B6 783 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 MEAF6Q9HAF1 191 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 TRNAU1APQ9NX07 287 aaKnown RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 LAMA4Q16363 1823 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CACNA1SQ13698 1873 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CHD4Q14839 1912 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 SAP18O00422 153 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms