RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SAMD4BQ5PRF9 694 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 KIAA1211LQ6NV74 962 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ZNF621Q6ZSS3 439 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 DPPA4Q7L190 304 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 DHDDSQ86SQ9 333 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PPP3R2Q96LZ3 170 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 LYSMD1Q96S90 227 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 LGR4Q9BXB1 951 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PTBP2Q9UKA9 531 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PLXNA3P51805 1871 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 A0A1W2PQU0 124 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 E7EQ34 232 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 WISP3O95389 354 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 GPX3P22352 226 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ALDH9A1P49189 494 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ILF2Q12905 390 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PPP1R8Q12972 351 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 EIF4HQ15056 248 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ZNF542PQ5EBM4 170 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 TMTC4Q5T4D3 741 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 HENMT1Q5T8I9 393 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ETFBKMTQ8IXQ9 262 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 SIPA1Q96FS4 1042 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 FERD3LQ96RJ6 166 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 TMEM245Q9H330 911 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 MARK1Q9P0L2 795 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 THEGQ9P2T0 379 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 SEC16AO15027 2179 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 TRBV5-4A0A0C4DH59 114 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 MGAT4DA6NG13 374 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 GNGT2O14610 69 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 VPS4BO75351 444 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 MYO1DO94832 1006 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 SEC24DO94855 1032 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 SNUPNO95149 360 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 B3GALT4O96024 378 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ITGB7P26010 798 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PRDX6P30041 224 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 S100A3P33764 101 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PXNP49023 591 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ADARP55265 1226 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 SLC44A2Q8IWA5 706 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 FBXO30Q8TB52 745 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ASB11Q8WXH4 323 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 TFGQ92734 400 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 LRRC58Q96CX6 371 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 LRIG1Q96JA1 1093 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 EFHD1Q9BUP0 239 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 OR51B5Q9H339 312 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 WDR26Q9H7D7 661 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PRPF19Q9UMS4 504 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 DTNAQ9Y4J8 743 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 PIAS3Q9Y6X2 628 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 CCDC160A6NGH7 325 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 SLC35G4P0C7Q5 338 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 YBX1P67809 324 aaKnown RBP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 LIPEQ05469 1076 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 GALNT1Q10472 559 aaPredicted RBP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 GTDC1Q4AE62 458 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 CATSPEREQ5SY80 951 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 OR5AR1Q8NGP9 310 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 HMGCLL1Q8TB92 370 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 ABHD8Q96I13 439 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 RNF145Q96MT1 663 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 SLC12A9Q9BXP2 914 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 MBNL1Q9NR56 388 aaKnown RBP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 RAD18Q9NS91 495 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 C1orf109Q9NX04 203 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 LEF1Q9UJU2 399 aaPredicted RBP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 H0Y858 1186 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 INHBCP55103 352 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 DOC2AQ14183 400 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 TRIM25Q14258 630 aaKnown RBP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 PCBP2Q15366 365 aaKnown RBP eCLIP9.1□□□□□ -0.956e-8■■■■□ 21
NUDCD3-203ENST00000460110 FRG2Q64ET8 278 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 FAM91A1Q658Y4 838 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 SPATA19Q7Z5L4 167 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 CANT1Q8WVQ1 401 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 LRTOMTQ8WZ04 291 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 MAELQ96JY0 434 aaKnown RBP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 C12orf66Q96MD2 445 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 FRG2BQ96QU4 278 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 PKP4Q99569 1192 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 CAAP1Q9H8G2 361 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 INVSQ9Y283 1065 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 PLEKHM1Q9Y4G2 1056 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 PCDHGA7Q9Y5G6 932 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 TANC1Q9C0D5 1861 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 KLHL33A6NCF5 533 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 OR52A4PA6NMU1 304 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 WFS1O76024 890 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 COX7A2P14406 83 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 TACR1P25103 407 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 MTX3Q5HYI7 312 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 OTUD3Q5T2D3 398 aaPredicted RBP9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 ANO7Q6IWH7 933 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 PDPRQ8NCN5 879 aa9.1□□□□□ -0.95
NUDCD3-203ENST00000460110 OR10A6Q8NH74 314 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms