RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PRRT3Q5FWE3 981 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 IER5LQ5T953 404 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 MED27Q6P2C8 311 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SBSNQ6UWP8 590 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 WASH2PQ6VEQ5 465 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 CYHR1Q6ZMK1 362 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 GOLGA7Q7Z5G4 137 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPATA19Q7Z5L4 167 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ABI3BPQ7Z7G0 1075 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 WDR5BQ86VZ2 330 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 THOC6Q86W42 341 aaKnown RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMEFF1Q8IYR6 380 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF781Q8N8C0 355 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 CDYL2Q8N8U2 506 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PNPLA1Q8N8W4 532 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 FAM46DQ8NEK8 389 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 TTLQ8NG68 377 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 OR13H1Q8NG92 308 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 GIMAP7Q8NHV1 300 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 MAPK15Q8TD08 544 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 UBTD2Q8WUN7 234 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 GAB3Q8WWW8 586 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 STARD8Q92502 1023 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 MCUR1Q96AQ8 359 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PTCD3Q96EY7 689 aaKnown RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PPP3R2Q96LZ3 170 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 RAB3IPQ96QF0 476 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 HS3ST6Q96QI5 342 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF382Q96SR6 550 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PRPF18Q99633 342 aaKnown RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC30A3Q99726 388 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 AIF1LQ9BQI0 150 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 CCDC28BQ9BUN5 200 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 EFCAB11Q9BUY7 163 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 NTMT1Q9BV86 223 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 C1QTNF3Q9BXJ4 246 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 NLNQ9BYT8 704 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC29A3Q9BZD2 475 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 NUF2Q9BZD4 464 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PITHD1Q9GZP4 211 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ACTR5Q9H9F9 607 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 WASH6PQ9NQA3 447 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 POT1Q9NUX5 634 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PLA2G2EQ9NZK7 142 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 TRPS1Q9UHF7 1281 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PCTPQ9UKL6 214 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ADAMTS6Q9UKP5 1117 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMPRSS11EQ9UL52 423 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF490Q9ULM2 529 aaPredicted RBP5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC22A14Q9Y267 594 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 PCDHB11Q9Y5F2 797 aa5.68□□□□□ -1.5
RNU1-88P-201ENST00000459274 A0A088AWK7 358 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 PIPSLA2A3N6 862 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 ANTXRLA6NF34 631 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 C2orf74A8MZ97 194 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 H0Y8X5 98 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 E2F3O00716 465 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 VILLO15195 856 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC22A2O15244 555 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 ITM2AO43736 263 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 GUCY1B2O75343 617 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 SEC22BO75396 215 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 OR4F21O95013 312 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 FKBP9O95302 570 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 SIX3O95343 332 aaPredicted RBP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 WISP3O95389 354 aaPredicted RBP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 CER1O95813 267 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 TSPAN12O95859 305 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC16A8O95907 504 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 CFIP05156 583 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 IGHV4-34P06331 123 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 CHRNGP07510 517 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 RPS17P08708 135 aaKnown RBP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 MTHFD1P11586 935 aaKnown RBP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 PCNAP12004 261 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 MTHFD2P13995 350 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 IDO1P14902 403 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 GM2AP17900 193 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 XRCC1P18887 633 aaPredicted RBP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF10P21506 573 aaPredicted RBP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 ITPKAP23677 461 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 GSTM2P28161 218 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 PDHA2P29803 388 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 HOXD12P35452 270 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 BDKRB1P46663 353 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 FNTBP49356 437 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 ARL4DP49703 201 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 RAB28P51157 221 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 RAP1GDS1P52306 607 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 NUBP1P53384 320 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 SKP1P63208 163 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 ABATP80404 500 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 TIAL1Q01085 375 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 ART3Q13508 389 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 SIM2Q14190 667 aaPredicted RBP5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 MAP7Q14244 749 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 FGL2Q14314 439 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 GBX1Q14549 363 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 NR6A1Q15406 480 aa5.67□□□□□ -1.5
RNU1-88P-201ENST00000459274 CPSF6Q16630 551 aaKnown RBP eCLIP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms