RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 PAQR3Q6TCH7 311 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 CYHR1Q6ZMK1 362 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 NEK10Q6ZWH5 1172 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 PIWIL4Q7Z3Z4 852 aaKnown RBP9.76□□□□□ -0.85
RFX3-210ENST00000457373 CLEC14AQ86T13 490 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 SLC26A11Q86WA9 606 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 CTAGE3PQ8IX95 158 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 RAB42Q8N4Z0 105 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 LRRN4CLQ8ND94 238 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 MAGEC3Q8TD91 643 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 FBF1Q8TES7 1133 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 EEF1AKMT1Q8WVE0 214 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 KLHL6Q8WZ60 621 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 UBXN4Q92575 508 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 KCTD12Q96CX2 325 aaKnown RBP9.76□□□□□ -0.85
RFX3-210ENST00000457373 RNF31Q96EP0 1072 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 OR6C1Q96RD1 312 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 CD180Q99467 661 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 KLHL25Q9H0H3 589 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 APMAPQ9HDC9 416 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 SOHLH2Q9NX45 425 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 NSMCE4AQ9NXX6 385 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 SPHK1Q9NYA1 384 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 FOXJ2Q9P0K8 574 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 TXNDC16Q9P2K2 825 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 KLHL42Q9P2K6 505 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 POMT2Q9UKY4 750 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 CORO1CQ9ULV4 474 aaPredicted RBP9.76□□□□□ -0.85
RFX3-210ENST00000457373 VWA7Q9Y334 891 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 B3GALT1Q9Y5Z6 326 aa9.76□□□□□ -0.85
RFX3-210ENST00000457373 PCM1Q15154 2024 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 FAM159BA6NKW6 160 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 SRRM3A6NNA2 597 aaPredicted RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 B4E171 279 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 ERVH48-1M5A8F1 160 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 RASGRF2O14827 1237 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 POLR1CO15160 346 aaPredicted RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 NVLO15381 856 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 ZBTB14O43829 449 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 PSIP1O75475 530 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 ZBTB11O95625 1053 aaPredicted RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 SYF2O95926 243 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 CATP04040 527 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 EBLN1P0CF75 366 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 CBSLP0DN79 551 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 ENO3P13929 434 aaPredicted RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 PVRP15151 417 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 ST6GAL1P15907 406 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 UGT2B7P16662 529 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 NELFEP18615 380 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 CD9P21926 228 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 FDXRP22570 491 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 MAP4P27816 1152 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 CBSP35520 551 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 CCNFP41002 786 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 EIF2S3P41091 472 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 TSPAN7P41732 249 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 RGS4P49798 205 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 RAB28P51157 221 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 PCBP4P57723 403 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 TSTA3Q13630 321 aaPredicted RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 KCNAB1Q14722 419 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 KBTBD12Q3ZCT8 623 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 TEX35Q5T0J7 233 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 DCAF12Q5T6F0 453 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 CEACAM20Q6UY09 585 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 LRRC69Q6ZNQ3 347 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 CEP128Q6ZU80 1094 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 UBE2R2Q712K3 238 aaPredicted RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 TRIM73Q86UV7 250 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 ZC3HC1Q86WB0 502 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 ZFAND4Q86XD8 727 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 IFT20Q8IY31 132 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 MYO1HQ8N1T3 1032 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 PPM1NQ8N819 430 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 BMPERQ8N8U9 685 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 ZNF248Q8NDW4 579 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 OR9A1PQ8NGU1 263 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 OR2L8Q8NGY9 312 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 SNIP1Q8TAD8 396 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 KCNE4Q8WWG9 221 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 OR2A14Q96R47 310 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 OLFM1Q99784 485 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 CDC42EP4Q9H3Q1 356 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 L2HGDHQ9H9P8 463 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 FBXO8Q9NRD0 319 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 C1GALT1Q9NS00 363 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 NINJ2Q9NZG7 142 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 OR6C2Q9NZP2 312 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 SEMA5BQ9P283 1151 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 LNPEPQ9UIQ6 1025 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 NFU1Q9UMS0 254 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 MTO1Q9Y2Z2 717 aaKnown RBP9.75□□□□□ -0.85
RFX3-210ENST00000457373 PCDHGA7Q9Y5G6 932 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 ANKRD12Q6UB98 2062 aa9.75□□□□□ -0.85
RFX3-210ENST00000457373 NCOR2Q9Y618 2525 aa9.74□□□□□ -0.85
RFX3-210ENST00000457373 ARHGEF33A8MVX0 844 aa9.74□□□□□ -0.85
RFX3-210ENST00000457373 RRP8O43159 456 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms