RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ADCK2Q7Z695 626 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 MRGPRGQ86SM5 289 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TAC4Q86UU9 113 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 EXOC3L1Q86VI1 746 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 IQCHQ86VS3 1027 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ARID3BQ8IVW6 561 aaPredicted RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 KLHL7Q8IXQ5 586 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CFAP206Q8IYR0 622 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 DCP1BQ8IZD4 617 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 AGBL3Q8NEM8 1001 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 OR6Y1Q8NGX8 325 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 EXOC6Q8TAG9 804 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ZNF596Q8TC21 504 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 LRRC20Q8TCA0 184 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 DLG3Q92796 817 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 RFT1Q96AA3 541 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TMEM186Q96B77 213 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 OTUB2Q96DC9 234 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 MTFMTQ96DP5 389 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 RNF31Q96EP0 1072 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 EEF2KMTQ96G04 330 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ZNF479Q96JC4 524 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SLC41A2Q96JW4 573 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 LURAP1Q96LR2 239 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CCDC17Q96LX7 622 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 C12orf66Q96MD2 445 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SPATA13Q96N96 652 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TRAPPC9Q96Q05 1148 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 MGME1Q9BQP7 344 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 UBAC1Q9BSL1 405 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 GON7Q9BXV9 100 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 GPR87Q9BY21 358 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 RTN4RQ9BZR6 473 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 DERL2Q9GZP9 239 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 IL21RQ9HBE5 538 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 PNO1Q9NRX1 252 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 C19orf12Q9NSK7 152 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 FAM212BQ9NTI7 297 aaPredicted RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 MAN2C1Q9NTJ4 1040 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 EXD2Q9NVH0 621 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 OXSMQ9NWU1 459 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SYBUQ9NX95 663 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 RBAKQ9NYW8 714 aaPredicted RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 ERVK-18Q9QC07 812 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 DNAJB11Q9UBS4 358 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 WARS2Q9UGM6 360 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 DBNLQ9UJU6 430 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 CDH7Q9ULB5 785 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 PPIEQ9UNP9 301 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 PLCL2Q9UPR0 1127 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 PLLPQ9Y342 182 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 LRRC42Q9Y546 428 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 NOX1Q9Y5S8 564 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 V9GYQ6 96 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 KNDC1Q76NI1 1749 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 KIAA1551Q9HCM1 1747 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 USP6P35125 1406 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CRB1P82279 1406 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ABCC11Q96J66 1382 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 COL18A1P39060 1754 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PTPRCP08575 1304 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 BRCA1P38398 1863 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 TNRC6CQ9HCJ0 1690 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 A0A0G2JLW4 131 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 FAM149AA5PLN7 773 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PCP4L1A6NKN8 68 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 ERVV-1B6SEH8 477 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 F8WDY8 70 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 TSPAN4O14817 238 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PPM1DO15297 605 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SLC16A3O15427 465 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 ARHGEF9O43307 516 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 B4GAT1O43505 415 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 JRKO75564 520 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 ACTL6BO94805 426 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 KAT7O95251 611 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 OXSR1O95747 527 aaPredicted RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 IL1BP01584 269 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PRKCBP05771 671 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 ABHD2P08910 425 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 EPORP19235 508 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 NCF2P19878 526 aaPredicted RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 EPHA8P29322 1005 aaPredicted RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 SHMT1P34896 483 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SOAT1P35610 550 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SREBF1P36956 1147 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MAGEA11P43364 429 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 KIR3DL2P43630 455 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 NRIP1P48552 1158 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 TMED10P49755 219 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 PDE1AP54750 535 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 ANTXR2P58335 489 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 NANOS3P60323 173 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 SMAD3P84022 425 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 PPP2R2BQ00005 443 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 TGM3Q08188 693 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SLAQ13239 276 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MAB21L1Q13394 359 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 NAB1Q13506 487 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PIGHQ14442 188 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms