RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 DHX34Q14147 1143 aaKnown RBP17.22■□□□□ 0.35
MSH6-207ENST00000456246 ANKRD20A4Q4UJ75 823 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 CTSL3PQ5NE16 218 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 PRAMEF17Q5VTA0 474 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 TMEM135Q86UB9 458 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 LINC01555Q8NAE3 123 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 HMGCLL1Q8TB92 370 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 CALML6Q8TD86 181 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 DENND1AQ8TEH3 1009 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 COG1Q8WTW3 980 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 ZNF669Q96BR6 464 aaPredicted RBP17.22■□□□□ 0.35
MSH6-207ENST00000456246 FAM60AQ9NP50 221 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 SPATA7Q9P0W8 599 aa17.22■□□□□ 0.35
MSH6-207ENST00000456246 GOLGA8KD6RF30 607 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 E5RI56 91 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 H3BMH7 237 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 GOLGA8TH3BQL2 631 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 ZSCAN9O15535 394 aaPredicted RBP17.21■□□□□ 0.35
MSH6-207ENST00000456246 USP1O94782 785 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 C1orf105O95561 183 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 PKMP14618 531 aaKnown RBP17.21■□□□□ 0.35
MSH6-207ENST00000456246 CHRM3P20309 590 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 FMO4P31512 558 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 MAGEA3P43357 314 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 RPS18P62269 152 aaKnown RBP17.21■□□□□ 0.35
MSH6-207ENST00000456246 GRB7Q14451 532 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 GBX1Q14549 363 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 NAA25Q14CX7 972 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 NCF4Q15080 339 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 PPP1R7Q15435 360 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 ZIC1Q15915 447 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 TTLL9Q3SXZ7 439 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 ZNF470Q6ECI4 717 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 RHBDD2Q6NTF9 364 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 TCTN3Q6NUS6 607 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 FAM198BQ6UWH4 519 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 PPIL6Q8IXY8 311 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 DNAJC22Q8N4W6 341 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 ENDOVQ8N8Q3 282 aaKnown RBP17.21■□□□□ 0.35
MSH6-207ENST00000456246 NAT8LQ8N9F0 302 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 GABPB2Q8TAK5 448 aaPredicted RBP17.21■□□□□ 0.35
MSH6-207ENST00000456246 RUFY1Q96T51 708 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 FAM114A2Q9NRY5 505 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 IRAK4Q9NWZ3 460 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.21■□□□□ 0.35
MSH6-207ENST00000456246 KLHL42Q9P2K6 505 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 TCFL5Q9UL49 500 aa17.21■□□□□ 0.35
MSH6-207ENST00000456246 SNRNP200O75643 2136 aaKnown RBP17.2■□□□□ 0.34
MSH6-207ENST00000456246 NIPSNAP2O75323 286 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 MAGP20916 626 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 ZC3H12BQ5HYM0 836 aaKnown RBP17.2■□□□□ 0.34
MSH6-207ENST00000456246 ZNF385CQ66K41 422 aaPredicted RBP17.2■□□□□ 0.34
MSH6-207ENST00000456246 CENPUQ71F23 418 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 ZBTB2Q8N680 514 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 DLG3Q92796 817 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 NDC1Q9BTX1 674 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 CCDC68Q9H2F9 335 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 TXLNGQ9NUQ3 528 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 CRYL1Q9Y2S2 319 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 COMMD10Q9Y6G5 202 aa17.2■□□□□ 0.34
MSH6-207ENST00000456246 ZCWPW2A0A1B0GU75 182 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 CTAGE9A4FU28 777 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 TARM1B6A8C7 271 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 GOLGA8MH3BSY2 632 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 WISP1O95388 367 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 MATN4O95460 622 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 CAPN1P07384 714 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 NFKB2Q00653 900 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 IL10RAQ13651 578 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 SF1Q15637 639 aaKnown RBP17.19■□□□□ 0.34
MSH6-207ENST00000456246 LONRF1Q17RB8 773 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 DEFB110Q30KQ9 67 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 PTCHD3Q3KNS1 767 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 CNSTQ6PJW8 725 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 NEK10Q6ZWH5 1172 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 PCGF5Q86SE9 256 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 PTRH1Q86Y79 214 aaKnown RBP17.19■□□□□ 0.34
MSH6-207ENST00000456246 KCNJ9Q92806 393 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 SLCO2A1Q92959 643 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 ZUFSPQ96AP4 578 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 RUNDC3BQ96NL0 473 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 IP6K3Q96PC2 410 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 IL17FQ96PD4 163 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 KCNF1Q9H3M0 494 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 ZNF71Q9NQZ8 489 aaPredicted RBP17.19■□□□□ 0.34
MSH6-207ENST00000456246 TRMT1Q9NXH9 659 aaKnown RBP17.19■□□□□ 0.34
MSH6-207ENST00000456246 EURLQ9NYK6 297 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 NFS1Q9Y697 457 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 MAD1L1Q9Y6D9 718 aa17.19■□□□□ 0.34
MSH6-207ENST00000456246 CATP04040 527 aaKnown RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 CASRP41180 1078 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 BDKRB1P46663 353 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 CSRP3P50461 194 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 ARSFP54793 590 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 DCDP81605 110 aaKnown RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 KLRB1Q12918 225 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 ARHGAP19Q14CB8 494 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 TCTE1Q5JU00 501 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 RNASEH2BQ5TBB1 312 aaKnown RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 YOD1Q5VVQ6 348 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms