RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 KLK3P07288 261 aaPredicted RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 TPBGLP0DKB5 382 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 PGDP52209 483 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 ITGA1P56199 1179 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 FOXL2P58012 376 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 RAPSNQ13702 412 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 ZIC1Q15915 447 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 C1orf189Q5VU69 101 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 IZUMO3Q5VZ72 239 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 PAPD7Q5XG87 772 aaKnown RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 TTC23LQ6PF05 361 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 CAND1Q86VP6 1230 aaKnown RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 FAM20CQ8IXL6 584 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 KLHL7Q8IXQ5 586 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 TBC1D21Q8IYX1 336 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 OR8K5Q8NH50 307 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 ZNF669Q96BR6 464 aaPredicted RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 TCF12Q99081 682 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 TFB2MQ9H5Q4 396 aaKnown RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 SPHK1Q9NYA1 384 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 MARCH4Q9P2E8 410 aaPredicted RBP12.49□□□□□ -0.41
TREX1-203ENST00000456089 TCFL5Q9UL49 500 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
TREX1-203ENST00000456089 USP9XQ93008 2570 aaPredicted RBP12.48□□□□□ -0.41
TREX1-203ENST00000456089 FAM237BA0A1B0GVD1 139 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 SLC5A10A0PJK1 596 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 CLEC18AA5D8T8 446 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 TTLL8A6PVC2 850 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 IQCF5A8MTL0 148 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 C2orf74A8MZ97 194 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 GOLGA8KD6RF30 607 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 E5RI56 91 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 H3BMM5 538 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 GOLGA8TH3BQL2 631 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 MASP2O00187 686 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 ZNF749O43361 778 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 TMEM63AO94886 807 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 UGT2B7P16662 529 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 FMO4P31512 558 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 CCR7P32248 378 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 SHMT2P34897 504 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 ATP1A4Q13733 1029 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 SLC9A5Q14940 896 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 DNAJC21Q5F1R6 531 aaKnown RBP12.48□□□□□ -0.41
TREX1-203ENST00000456089 NEPROQ6NW34 567 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 SPESP1Q6UW49 350 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 CLEC18BQ6UXF7 455 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 UNC5AQ6ZN44 842 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 SYDE1Q6ZW31 735 aaPredicted RBP12.48□□□□□ -0.41
TREX1-203ENST00000456089 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 CARFQ8N187 725 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 KRT222Q8N1A0 295 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 ZBTB2Q8N680 514 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 CLEC18CQ8NCF0 446 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 CFAP61Q8NHU2 1237 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 GABPB2Q8TAK5 448 aaPredicted RBP12.48□□□□□ -0.41
TREX1-203ENST00000456089 THAP4Q8WY91 577 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 FOPNLQ96NB1 174 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 NLNQ9BYT8 704 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 SLC7A5P2Q9GIP4 190 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 SPRTNQ9H040 489 aaPredicted RBP12.48□□□□□ -0.41
TREX1-203ENST00000456089 CCDC68Q9H2F9 335 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 RNF14Q9UBS8 474 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 PCYOX1Q9UHG3 505 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 NEU2Q9Y3R4 380 aa12.48□□□□□ -0.41
TREX1-203ENST00000456089 MDC1Q14676 2089 aaKnown RBP12.48□□□□□ -0.41
TREX1-203ENST00000456089 DOCK10Q96BY6 2186 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
TREX1-203ENST00000456089 E7EQ34 232 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 CCDC188H7C350 402 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 DNALI1O14645 258 aaPredicted RBP12.47□□□□□ -0.41
TREX1-203ENST00000456089 CBSLP0DN79 551 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 CHRM3P20309 590 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 OGNP20774 298 aaKnown RBP12.47□□□□□ -0.41
TREX1-203ENST00000456089 GNLYP22749 145 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 RPS3P23396 243 aaKnown RBP eCLIP12.47□□□□□ -0.41
TREX1-203ENST00000456089 PEBP1P30086 187 aaKnown RBP12.47□□□□□ -0.41
TREX1-203ENST00000456089 CASQ1P31415 396 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 OTX2P32243 289 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 CBSP35520 551 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 DR1Q01658 176 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 PTK6Q13882 451 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 ANKRD20A4Q4UJ75 823 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 HIST2H2BCQ6DN03 193 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 CREG2Q8IUH2 290 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 C2orf73Q8N5S3 287 aaPredicted RBP12.47□□□□□ -0.41
TREX1-203ENST00000456089 NAT8LQ8N9F0 302 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 C19orf47Q8N9M1 422 aaKnown RBP12.47□□□□□ -0.41
TREX1-203ENST00000456089 FDCSPQ8NFU4 85 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 OR5K2Q8NHB8 316 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 FLVCR1-AS1Q8TAF5 88 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 CPT1CQ8TCG5 803 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 CALML6Q8TD86 181 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 LRFN5Q96NI6 719 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms