RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CARFQ8N187 725 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KRT222Q8N1A0 295 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SIRT6Q8N6T7 355 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR11G2Q8NGC1 345 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DNAJB14Q8TBM8 379 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PROKR1Q8TCW9 393 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PPP4R1Q8TF05 950 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TM9SF4Q92544 642 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FAM136AQ96C01 138 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ULK4Q96C45 1275 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 THOC3Q96J01 351 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SPATA13Q96N96 652 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TAAR6Q96RI8 345 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SRPK1Q96SB4 655 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SLX1AQ9BQ83 275 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DPH2Q9BQC3 489 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCM2Q9BSQ5 444 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DHRS4Q9BTZ2 278 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CRB3Q9BUF7 120 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TSPAN10Q9H1Z9 355 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TFB2MQ9H5Q4 396 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MVB12BQ9H7P6 319 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NHEJ1Q9H9Q4 299 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AGPAT4Q9NRZ5 378 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OLAHQ9NV23 265 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DDX56Q9NY93 547 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EURLQ9NYK6 297 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C5AR2Q9P296 337 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SLC2A6Q9UGQ3 507 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ITGB1BP2Q9UKP3 347 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ENTPD4Q9Y227 616 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DNMT3AQ9Y6K1 912 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ACANP16112 2415 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TRBV5-4A0A0C4DH59 114 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 A0A0U1RQJ8 604 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCDC162PA2VCL2 907 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AGAP14A8MT82 685 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 APOC4-APOC2K7ER74 178 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MAP3K7O43318 606 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HNRNPRO43390 633 aaKnown RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DIAPH2O60879 1101 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CTSVO60911 334 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ANXA9O76027 345 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CRTAMO95727 393 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 APOC2P02655 101 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 UQCRHP07919 91 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RBP3P10745 1247 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MMP11P24347 488 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MSNP26038 577 aaKnown RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ACADLP28330 430 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ARHGAP25P42331 645 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TDGF1P3P51864 188 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VSX2P58304 361 aaPredicted RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KRTAP10-9P60411 292 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TPM4P67936 248 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AIMP2Q13155 320 aaKnown RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SEMA3AQ14563 771 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TUBB8Q3ZCM7 444 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AGAP7PQ5VUJ5 663 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ITPRIPL1Q6GPH6 555 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FRMPD2BQ6IN97 320 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DARS2Q6PI48 645 aaKnown RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RANBP10Q6VN20 620 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PRUNE1Q86TP1 453 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HPS6Q86YV9 775 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CDKL3Q8IVW4 592 aaPredicted RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DNAJC22Q8N4W6 341 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FAM71DQ8N9W8 422 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RNF214Q8ND24 703 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR8K1Q8NGG5 319 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR1N1Q8NGS0 311 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DTX3LQ8TDB6 740 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 BRIX1Q8TDN6 353 aaKnown RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FAR1Q8WVX9 515 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZFPM2Q8WW38 1151 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ITLN2Q8WWU7 325 aaPredicted RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ATG4AQ8WYN0 398 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ALG3Q92685 438 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PTERQ96BW5 349 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCDC120Q96HB5 630 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCDC42Q96M95 316 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AGAP4Q96P64 663 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SELENOSQ9BQE4 189 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MENTQ9BUN1 341 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AP1M1Q9BXS5 423 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VPS37BQ9H9H4 285 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ATP13A2Q9NQ11 1180 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CUTCQ9NTM9 273 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PTGFRNQ9P2B2 879 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MARCH4Q9P2E8 410 aaPredicted RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 COPG2Q9UBF2 871 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PACSIN2Q9UNF0 486 aaPredicted RBP5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PLCL2Q9UPR0 1127 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ALG6Q9Y672 507 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AP1M2Q9Y6Q5 423 aa5.74□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LOC105369274A0A096LPK9 316 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TRGV8A0A0C4DH27 118 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LOC102723532A0A0G2JNH3 316 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 A0A0J9YVX5 310 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TCRBV7S2A1N4TA0A589 114 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms