RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MAP4P27816 1152 aaKnown RBP27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC12A2P55011 1212 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 ZKSCAN8Q15776 578 aaPredicted RBP27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 CYP2A13Q16696 494 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 ANKS6Q68DC2 871 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 SPESP1Q6UW49 350 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 NKAPQ8N5F7 415 aaKnown RBP27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 TSPAN17Q96FV3 270 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC12A9Q9BXP2 914 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 GPAMQ9HCL2 828 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 LNPEPQ9UIQ6 1025 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 CHD8Q9HCK8 2581 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 TMEM8BA6NDV4 472 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 RIPK2O43353 540 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 PRICKLE3O43900 615 aaPredicted RBP27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 CDH3P22223 829 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 MAPK10P53779 464 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 ERVPABLB-1P60509 514 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 MC2RQ01718 297 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 SP140Q13342 867 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 ARHGAP19Q14CB8 494 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 TBC1D25Q3MII6 688 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 FBXO38Q6PIJ6 1188 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 CLEC14AQ86T13 490 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 FAM129CQ86XR2 697 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 C2orf73Q8N5S3 287 aaPredicted RBP27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 ANKRD49Q8WVL7 239 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC44A1Q8WWI5 657 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 ANKRD7Q92527 254 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 MRRFQ96E11 262 aaKnown RBP27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 ZNF578Q96N58 590 aaPredicted RBP27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 B3GNT4Q9C0J1 378 aa27.05■■□□□ 1.92
SMARCC1-203ENST00000454240 ISM1B1AKI9 464 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 ZBTB11O95625 1053 aaPredicted RBP27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 STMN1P16949 149 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 KDF1Q8NAX2 398 aaPredicted RBP27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 UHMK1Q8TAS1 419 aaKnown RBP27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC22A18Q96BI1 424 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 TAAR9Q96RI9 348 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 PARVBQ9HBI1 364 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 FBXO8Q9NRD0 319 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 PDE10AQ9Y233 779 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 PCDHGA7Q9Y5G6 932 aa27.04■■□□□ 1.92
SMARCC1-203ENST00000454240 HMX2A2RU54 273 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC9B1P1A6NJY1 282 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 NVLO15381 856 aaKnown RBP27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 CYP2A7P20853 494 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 HSD17B2P37059 387 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 RAB10P61026 200 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 HSD11B2P80365 405 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 FASTKQ14296 549 aaKnown RBP27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC5A12Q1EHB4 618 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 D2HGDHQ8N465 521 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 MCOLN3Q8TDD5 553 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 USP7Q93009 1102 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 CNTNAP3BQ96NU0 1288 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 TRAPPC9Q96Q05 1148 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 CNTNAP3Q9BZ76 1288 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 EPB41L4BQ9H329 900 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 THSD1Q9NS62 852 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC39A1Q9NY26 324 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 IKZF3Q9UKT9 509 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 BTRCQ9Y297 605 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 PCDHGA3Q9Y5H0 932 aa27.03■■□□□ 1.92
SMARCC1-203ENST00000454240 A0A1W2PPV9 198 aa27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 C9orf172C9J069 976 aa27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 PHGDHO43175 533 aaKnown RBP27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC16A8O95907 504 aa27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 ST6GAL1P15907 406 aa27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 VSNL1P62760 191 aa27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 SH3BP2P78314 561 aa27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 UAP1Q16222 522 aaPredicted RBP27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 ZNF480Q8WV37 535 aa27.02■■□□□ 1.92
SMARCC1-203ENST00000454240 A0A0J9YY10 115 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 SYF2O95926 243 aaKnown RBP27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 OAS2P29728 719 aaKnown RBP27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 PNLIPRP1P54315 467 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 RAB15P59190 212 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 PHKG1Q16816 387 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 MROH9Q5TGP6 573 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 TRIM73Q86UV7 250 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 TAX1BP1Q86VP1 789 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 ZCCHC14Q8WYQ9 949 aaKnown RBP27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 PMEPA1Q969W9 287 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 UBXN10Q96LJ8 280 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 CCDC138Q96M89 665 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 PAFAH2Q99487 392 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 DDA1Q9BW61 102 aa27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 V9GYY5 206 aaPredicted RBP27.01■■□□□ 1.91
SMARCC1-203ENST00000454240 ZNF839A8K0R7 811 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 INHBAP08476 426 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 PVRP15151 417 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 FOLR1P15328 257 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 SLC5A2P31639 672 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 ARL4DP49703 201 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 SLC29A2Q14542 456 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 KCNAB1Q14722 419 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 TMEM164Q5U3C3 297 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 WDR93Q6P2C0 686 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms