RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PPIL6Q8IXY8 311 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 C2orf73Q8N5S3 287 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-203ENST00000454233 ENDOVQ8N8Q3 282 aaKnown RBP10.3□□□□□ -0.76
DDX39A-203ENST00000454233 FLVCR1-AS1Q8TAF5 88 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 BIRC8Q96P09 236 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 IL17FQ96PD4 163 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 C17orf62Q9BQA9 187 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 NLNQ9BYT8 704 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 CCDC68Q9H2F9 335 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 ZNF71Q9NQZ8 489 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-203ENST00000454233 TXLNGQ9NUQ3 528 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 INTS10Q9NVR2 710 aaKnown RBP10.3□□□□□ -0.76
DDX39A-203ENST00000454233 CIDEBQ9UHD4 219 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 SRPK3Q9UPE1 567 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 PLCL2Q9UPR0 1127 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 CRYL1Q9Y2S2 319 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 NEU2Q9Y3R4 380 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 MAD1L1Q9Y6D9 718 aa10.3□□□□□ -0.76
DDX39A-203ENST00000454233 SMG1Q96Q15 3661 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 HELZ2Q9BYK8 2649 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 ZNF185O15231 689 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 ZSCAN9O15535 394 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 NIPSNAP2O75323 286 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 FKBP9O95302 570 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 C1orf105O95561 183 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 PKMP14618 531 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 MAGP20916 626 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 ATP5DP30049 168 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 PEBP1P30086 187 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 BDKRB1P46663 353 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 GABRA4P48169 554 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 PMS2P54278 862 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 GRB7Q14451 532 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 SF1Q15637 639 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 LONRF1Q17RB8 773 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 TTLL9Q3SXZ7 439 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 LCN10Q6JVE6 187 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 CNSTQ6PJW8 725 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 CENPUQ71F23 418 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 TAX1BP1Q86VP1 789 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 APLFQ8IW19 511 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 LMNTD2Q8IXW0 634 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 DNAJC22Q8N4W6 341 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 ZBTB2Q8N680 514 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 LINC01555Q8NAE3 123 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 PROKR1Q8TCW9 393 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 CALML6Q8TD86 181 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 FAM136AQ96C01 138 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 TRIM56Q9BRZ2 755 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 DHRS4Q9BTZ2 278 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 MENTQ9BUN1 341 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 SPRTNQ9H040 489 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 KCNF1Q9H3M0 494 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 ASIC3Q9UHC3 531 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 GPN3Q9UHW5 284 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 TSR3Q9UJK0 312 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 ANAPC2Q9UJX6 822 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 TCFL5Q9UL49 500 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 PADI2Q9Y2J8 665 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 NFS1Q9Y697 457 aa10.29□□□□□ -0.76
DDX39A-203ENST00000454233 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
DDX39A-203ENST00000454233 SEC16AO15027 2179 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 ZCWPW2A0A1B0GU75 182 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 USP1O94782 785 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 CD63P08962 238 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 DCDP81605 110 aaKnown RBP10.28□□□□□ -0.76
DDX39A-203ENST00000454233 IL10RAQ13651 578 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 NCF4Q15080 339 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 ZC3H12BQ5HYM0 836 aaKnown RBP10.28□□□□□ -0.76
DDX39A-203ENST00000454233 RHBDD2Q6NTF9 364 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 TCTN3Q6NUS6 607 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 FIGLAQ6QHK4 219 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 FAM198BQ6UWH4 519 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 PCGF5Q86SE9 256 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 FAM20CQ8IXL6 584 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 ZNF655Q8N720 491 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-203ENST00000454233 NAT8LQ8N9F0 302 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 LMNTD1Q8N9Z9 388 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 GABPB2Q8TAK5 448 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-203ENST00000454233 DENND1AQ8TEH3 1009 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 DLG3Q92796 817 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 NDC1Q9BTX1 674 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 TRIM4Q9C037 500 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 ACSS2Q9NR19 701 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 FAM114A2Q9NRY5 505 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 C20orf96Q9NUD7 363 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-203ENST00000454233 EURLQ9NYK6 297 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 IL1RAPL1Q9NZN1 696 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 SPATA7Q9P0W8 599 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 NDOR1Q9UHB4 597 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 TLK1Q9UKI8 766 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 RUVBL2Q9Y230 463 aaKnown RBP10.28□□□□□ -0.76
DDX39A-203ENST00000454233 TP53TG5Q9Y2B4 290 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 KLHL20Q9Y2M5 609 aa10.28□□□□□ -0.76
DDX39A-203ENST00000454233 ARGFXA6NJG6 315 aa10.27□□□□□ -0.77
DDX39A-203ENST00000454233 TARM1B6A8C7 271 aa10.27□□□□□ -0.77
DDX39A-203ENST00000454233 H3BMH7 237 aa10.27□□□□□ -0.77
DDX39A-203ENST00000454233 PYCARD-AS1I3L0S3 204 aa10.27□□□□□ -0.77
DDX39A-203ENST00000454233 DNALI1O14645 258 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms