RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TOP3BO95985 862 aaKnown RBP11.8□□□□□ -0.52
SEC16A-207ENST00000453963 MAPK12P53778 367 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 HEPACAMQ14CZ8 416 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 RUNDC3AQ59EK9 446 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 SH3D19Q5HYK7 790 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 ZNF311Q5JNZ3 666 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
SEC16A-207ENST00000453963 SYPL2Q5VXT5 272 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 SLC39A4Q6P5W5 647 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 ZNF517Q6ZMY9 492 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-207ENST00000453963 PHYKPLQ8IUZ5 450 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 GPR135Q8IZ08 494 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 UBE2J2Q8N2K1 259 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 ZNF641Q96N77 438 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-207ENST00000453963 MYOCQ99972 504 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 FAM83DQ9H4H8 585 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 TBC1D17Q9HA65 648 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 AASSQ9UDR5 926 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 FAM25EA8MYX2 175 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-207ENST00000453963 CLIC1O00299 241 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 HLA-DQB2P05538 268 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 PEPDP12955 493 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 IDSP22304 550 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 GLDCP23378 1020 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 ITPKBP27987 946 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 ARSFP54793 590 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 PITPNAQ00169 270 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 NCCRP1Q6ZVX7 275 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-207ENST00000453963 MIPEPQ99797 713 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 ADAM7Q9H2U9 754 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 EXO5Q9H790 373 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 NECTIN3Q9NQS3 549 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 PIK3C2AO00443 1686 aa11.8□□□□□ -0.52
SEC16A-207ENST00000453963 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SH3PXD2BA1X283 911 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 A6NHS1 94 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 FAM163BP0C2L3 166 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CLCN4P51793 760 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 PPP2R2BQ00005 443 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 MADCAM1Q13477 382 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 TGFBIQ15582 683 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CAND1Q86VP6 1230 aaKnown RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 LGI4Q8N135 537 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 PQLC3Q8N755 202 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 COL21A1Q96P44 957 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 TRNT1Q96Q11 434 aaKnown RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 MAP10Q9P2G4 905 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 IQCF5A8MTL0 148 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SLC2A2P11168 524 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ZNF182P17025 639 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 DCDC1P59894 354 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ABHD18Q0P651 414 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 PPIGQ13427 754 aaKnown RBP eCLIP11.79□□□□□ -0.527e-7■■□□□ 13.4
SEC16A-207ENST00000453963 SMCO1Q147U7 214 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 TLR1Q15399 786 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SF1Q15637 639 aaKnown RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 WSCD2Q2TBF2 565 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 MYLK3Q32MK0 819 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ATP13A5Q4VNC0 1218 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SLITRK4Q8IW52 837 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CLIP4Q8N3C7 705 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SNX33Q8WV41 574 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SLC35F5Q8WV83 523 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 KCTD13Q8WZ19 329 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ZNF599Q96NL3 588 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 PIGVQ9NUD9 493 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SPIN1Q9Y657 262 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 OR6C70A6NIJ9 312 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ARFIP1P53367 373 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CRHR2Q13324 411 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 MSANTD2Q6P1R3 559 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CLEC20AQ6ZU45 233 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CYS1Q717R9 158 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CYP2U1Q7Z449 544 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 OR13C4Q8NGS5 318 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 EXOSC8Q96B26 276 aaKnown RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CDKN2AIPNLQ96HQ2 116 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 MMP27Q9H306 513 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CNOT11Q9UKZ1 510 aaKnown RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ARL5AQ9Y689 179 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 IFNA6P05013 189 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ATAT1Q5SQI0 421 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 OGFRL1Q5TC84 451 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 PGBD2Q6P3X8 592 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 SLC2A7Q6PXP3 512 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 RBM12BQ8IXT5 1001 aaKnown RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 OR10H5Q8NGA6 315 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 PYURFQ96I23 114 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 ADAMTS10Q9H324 1103 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 TOR3AQ9H497 397 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 CCDC177Q9NQR7 707 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-207ENST00000453963 GALPQ9UBC7 116 aa11.79□□□□□ -0.52
SEC16A-207ENST00000453963 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
SEC16A-207ENST00000453963 IFNA7P01567 189 aa11.78□□□□□ -0.52
SEC16A-207ENST00000453963 PRNPP04156 253 aa11.78□□□□□ -0.52
SEC16A-207ENST00000453963 IL7RP16871 459 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms