RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MCMBPQ9BTE3 642 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CNPPD1Q9BV87 410 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ADGRE3Q9BY15 652 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ALOXE3Q9BYJ1 711 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 RNF167Q9H6Y7 350 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ABCB9Q9NP78 766 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 SNX6Q9UNH7 406 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CCL15-CCL14A0A0B4J2E2 113 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 F8W810 466 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CNMDO75829 334 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 B3GALT4O96024 378 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 RPLP0P05388 317 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ACOX1Q15067 660 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CCL15Q16663 113 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 MS4A13Q5J8X5 152 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF648Q5T619 568 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 PHYKPLQ8IUZ5 450 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 GTPBP3Q969Y2 492 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 TMEM246Q9BRR3 403 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 TIGARQ9NQ88 270 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 RAI2Q9Y5P3 530 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 NOX1Q9Y5S8 564 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 TRIM64CA6NLI5 447 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 EPHA2P29317 976 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 SOAT1P35610 550 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 SLC15A1P46059 708 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 CD83Q01151 205 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 BOP1Q14137 746 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF691Q5VV52 312 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 MON1AQ86VX9 555 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 GALNT12Q8IXK2 581 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 PGAP3Q96FM1 320 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 INPP5KQ9BT40 448 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 OR51E2Q9H255 320 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 MOV10Q9HCE1 1003 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 AKIP1Q9NQ31 210 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 UTRNP46939 3433 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 GNG14A0A1W2PPG7 69 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 NUAK1O60285 661 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 GUCY1B2O75343 617 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 RPS17P08708 135 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 HTR1AP08908 422 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 IFI30P13284 250 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 ITPKAP23677 461 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 CRATP43155 626 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 PPP3CCP48454 512 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 RPS24P62847 133 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 NFKB2Q00653 900 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 USP39Q53GS9 565 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 DLEU7Q6UYE1 221 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 RGL4Q8IZJ4 473 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 ACBD6Q9BR61 282 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 PAQR5Q9NXK6 330 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 AGO1Q9UL18 857 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 ABCG2Q9UNQ0 655 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 SLC28A1O00337 649 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 TMCC2O75069 709 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 GABARAPO95166 117 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 IL6P05231 212 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 STSP08842 583 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 CD52P31358 61 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 RHOAP61586 193 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 SPIBQ01892 262 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 TAF10Q12962 218 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 PDZK1Q5T2W1 519 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 C8orf82Q6P1X6 216 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 NEK5Q6P3R8 708 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 CEP68Q76N32 757 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 WDR36Q8NI36 951 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 SLC38A4Q969I6 547 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 CNDP2Q96KP4 475 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 THUMPD1Q9NXG2 353 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 RPS6KA6Q9UK32 745 aa13.55□□□□□ -0.24
UBE2D3-210ENST00000453744 TNFRSF21O75509 655 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 PAX3P23760 479 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 KIR3DL1P43629 444 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 IL10RBQ08334 325 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 UBXN11Q5T124 520 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 RAB43Q86YS6 212 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 MMAAQ8IVH4 418 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 FAM217AQ8IXS0 508 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 GPR156Q8NFN8 814 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 OR8J3Q8NGG0 315 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 OMA1Q96E52 524 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 CDK5RAP1Q96SZ6 601 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 ADAM2Q99965 735 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 ACOT13Q9NPJ3 140 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 IFT52Q9Y366 437 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 UBR3Q6ZT12 1888 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 MCM3APO60318 1980 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 FPGTO14772 594 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 SNAI1O95863 264 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 CDH12P55289 794 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 CREMQ03060 361 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms