RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ATP1A2P50993 1020 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 ARL4CP56559 192 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 C2orf54Q08AI8 447 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 KLHL38Q2WGJ6 581 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 PRAMEF17Q5VTA0 474 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 C6orf15Q6UXA7 325 aaPredicted RBP15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 MAATS1Q7Z4T9 603 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 ESX1Q8N693 406 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 GALNT6Q8NCL4 622 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 FBXO15Q8NCQ5 510 aaPredicted RBP15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 LSM14AQ8ND56 463 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 OR1L3Q8NH93 324 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 INPP5DQ92835 1189 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 RAD51AP1Q96B01 352 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 ELMO2Q96JJ3 720 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 SYTL2Q9HCH5 934 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 SLC17A6Q9P2U8 582 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 ZC3H7BQ9UGR2 993 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 CIDEBQ9UHD4 219 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 CDC23Q9UJX2 597 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 CHMP2BQ9UQN3 213 aa15.55■□□□□ 0.08
SCAMP4-205ENST00000452128 ATXN7O15265 892 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 RPN2P04844 631 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 CTSBP07858 339 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 RORAP35398 523 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 CCNFP41002 786 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 BDKRB1P46663 353 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 GCGRP47871 477 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 CDKN2DP55273 166 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 RHDQ02161 417 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 LINC00303Q3SY05 128 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 ZDHHC24Q6UX98 284 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 FAM20CQ8IXL6 584 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 C19orf47Q8N9M1 422 aaKnown RBP15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 SEC14L1Q92503 715 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 DLG3Q92796 817 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 RNF31Q96EP0 1072 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 TCTN2Q96GX1 697 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 LRFN5Q96NI6 719 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 UBL7Q96S82 380 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 GPR21Q99679 349 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 KLHL25Q9H0H3 589 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 PCDHB3Q9Y5E6 796 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 PCDHGA6Q9Y5G7 932 aa15.54■□□□□ 0.08
SCAMP4-205ENST00000452128 A0A0J9YY10 115 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 TSPAN12O95859 305 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 MPC1LP0DKB6 136 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 CBSLP0DN79 551 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 CBSP35520 551 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 CARSP49589 748 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 PDIA2Q13087 525 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 CRTC2Q53ET0 693 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 RBM20Q5T481 1227 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 TMTC4Q5T4D3 741 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 FCRL6Q6DN72 434 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 CYB5D1Q6P9G0 228 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 CYS1Q717R9 158 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 LRRC56Q8IYG6 542 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 C2orf73Q8N5S3 287 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 IL22RA1Q8N6P7 574 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 BBOF1Q8ND07 529 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 OR2A1Q8NGT9 310 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 OR9A1PQ8NGU1 263 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 ZNF285Q96NJ3 590 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 PADI1Q9ULC6 663 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 PSAT1Q9Y617 370 aa15.53■□□□□ 0.08
SCAMP4-205ENST00000452128 BSNQ9UPA5 3926 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 ERVH48-1M5A8F1 160 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 EIF3FO00303 357 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 KDM1AO60341 852 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 NTRK1P04629 796 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 CAPN1P07384 714 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 ENO3P13929 434 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 SKIV2L2P42285 1042 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 ARL4DP49703 201 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 GPS2Q13227 327 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 FASTKQ14296 549 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 ZNF385CQ66K41 422 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 LCN10Q6JVE6 187 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 ANKMY2Q8IV38 441 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 FBXO36Q8NEA4 188 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 CFAP36Q96G28 342 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 C16orf45Q96MC5 204 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 PKP4Q99569 1192 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 LHX9Q9NQ69 397 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 SMYD2Q9NRG4 433 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 SPATA7Q9P0W8 599 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 KLHL20Q9Y2M5 609 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 MRFAP1Q9Y605 127 aa15.52■□□□□ 0.08
SCAMP4-205ENST00000452128 SNRNP200O75643 2136 aaKnown RBP15.52■□□□□ 0.07
SCAMP4-205ENST00000452128 TLN1Q9Y490 2541 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 ISM1B1AKI9 464 aa15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 E5RI56 91 aa15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 TK2O00142 265 aa15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 EIF3HO15372 352 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 NKX2-8O15522 239 aa15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 FKBP9O95302 570 aa15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 RECKO95980 971 aa15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 ITGB2P05107 769 aa15.51■□□□□ 0.07
SCAMP4-205ENST00000452128 YBX1P67809 324 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms