RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PTCHD3Q3KNS1 767 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 ACAD11Q709F0 780 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 SHISA5Q8N114 240 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 LINC01555Q8NAE3 123 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 MICAL1Q8TDZ2 1067 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 UCMAQ8WVF2 138 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 PYCR2Q96C36 320 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 APIPQ96GX9 242 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 CRLS1Q9UJA2 301 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 UTS2RQ9UKP6 389 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 G3BP2Q9UN86 482 aaKnown RBP6.4□□□□□ -1.38
USP46-202ENST00000451218 PCDH15Q96QU1 1955 aa6.4□□□□□ -1.38
USP46-202ENST00000451218 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 PRSS23O95084 383 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 NFATC1O95644 943 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SLC16A8O95907 504 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SOX18P35713 384 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 GRIA2P42262 883 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 HMGCS1Q01581 520 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SF1Q15637 639 aaKnown RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 ZNF284Q2VY69 593 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 RABL3Q5HYI8 236 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 LRIF1Q5T3J3 769 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 COL13A1Q5TAT6 717 aaPredicted RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 SLC2A7Q6PXP3 512 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 FAM129CQ86XR2 697 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 RNF148Q8N7C7 305 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 TSPEARQ8WU66 669 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 ZNF480Q8WV37 535 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 LRRC58Q96CX6 371 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 ERLEC1Q96DZ1 483 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 PKP2Q99959 881 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SPATA16Q9BXB7 569 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 FAM126AQ9BYI3 521 aaPredicted RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 SLC32A1Q9H598 525 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SARS2Q9NP81 518 aaKnown RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 ZIM2Q9NZV7 527 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 VAPAQ9P0L0 249 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 STON1Q9Y6Q2 735 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 THADAQ6YHU6 1953 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 WNT9AO14904 365 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 MID1O15344 667 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 GCM2O75603 506 aaPredicted RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 EGFP01133 1207 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 ACADSP16219 412 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 AMD1P17707 334 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 VCLP18206 1134 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SDC1P18827 310 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 MSH3P20585 1137 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 TEAD1P28347 426 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 RPIAP49247 311 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 NME5P56597 212 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 PSME3P61289 254 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 NAA20P61599 178 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 DMPKQ09013 629 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 ASPHQ12797 758 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 CAPRIN1Q14444 709 aaKnown RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 AGKQ53H12 422 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 LPCAT4Q643R3 524 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 PNCKQ6P2M8 343 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SLCO4C1Q6ZQN7 724 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 LRRC70Q7Z2Q7 622 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 SPATA19Q7Z5L4 167 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 TSEN54Q7Z6J9 526 aaKnown RBP6.4□□□□□ -1.39
USP46-202ENST00000451218 FAM86B1Q8N7N1 296 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 OR56A4Q8NGH8 313 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 ROPN1LQ96C74 230 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 EGLN2Q96KS0 407 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 NTN4Q9HB63 628 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 PKD2L2Q9NZM6 624 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 MAN2B2Q9Y2E5 1009 aa6.4□□□□□ -1.39
USP46-202ENST00000451218 C1orf226A1L170 272 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 C7orf72A4D263 438 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 A6NCN8 305 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 EML2O95834 649 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 RECKO95980 971 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 NEFHP12036 1026 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 PSMC3P17980 439 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 HYAL2Q12891 473 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 CCINQ13939 588 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 ADRM1Q16186 407 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 CFAP157Q5JU67 520 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 PTRHD1Q6GMV3 140 aaKnown RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 CAPRIN2Q6IMN6 1127 aaKnown RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 CYP20A1Q6UW02 462 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 MMAAQ8IVH4 418 aaKnown RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 PPFIBP2Q8ND30 876 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 OR2L2Q8NH16 312 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 TRPV5Q9NQA5 729 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 UBAP1Q9NZ09 502 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 SLC22A14Q9Y267 594 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 H0YIV9 168 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 BNIP3LO60238 219 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 WDR47O94967 919 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 C8GP07360 202 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 ENO3P13929 434 aaPredicted RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 IDO1P14902 403 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 LBPP18428 481 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 IGFALSP35858 605 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms