RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TCTN3Q6NUS6 607 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 TLDC1Q6P9B6 456 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 FAM20CQ8IXL6 584 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 SLC35F6Q8N357 371 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 OR2L8Q8NGY9 312 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 MAGEC3Q8TD91 643 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 GRK7Q8WTQ7 553 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 LPGAT1Q92604 370 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 ZNF669Q96BR6 464 aaPredicted RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 OSBPL9Q96SU4 736 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 SPRTNQ9H040 489 aaPredicted RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 XAB2Q9HCS7 855 aaKnown RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 ACSS2Q9NR19 701 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 GPN3Q9UHW5 284 aaPredicted RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 TLK1Q9UKI8 766 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 VPS9D1Q9Y2B5 631 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 PADI2Q9Y2J8 665 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 CRYL1Q9Y2S2 319 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 E5RI56 91 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 GOLGA8MH3BSY2 632 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 KIF5CO60282 957 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 NIPSNAP2O75323 286 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 DNAJB5O75953 348 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 TMEM63AO94886 807 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 C1orf105O95561 183 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 ESR1P03372 595 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 CCNFP41002 786 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 CASRP41180 1078 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 BDKRB1P46663 353 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 GABRA4P48169 554 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 KLRB1Q12918 225 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 THOC5Q13769 683 aaKnown RBP14.71□□□□□ -0.05
CHD3-205ENST00000449744 GRB7Q14451 532 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 NCF4Q15080 339 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 C1orf189Q5VU69 101 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 RHBDD2Q6NTF9 364 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 NEPROQ6NW34 567 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 CNSTQ6PJW8 725 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 FAM198BQ6UWH4 519 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 ASB18Q6ZVZ8 466 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 CAND1Q86VP6 1230 aaKnown RBP14.71□□□□□ -0.05
CHD3-205ENST00000449744 REXO1L1PQ8IX06 675 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 DNAJC22Q8N4W6 341 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 ZNF655Q8N720 491 aaPredicted RBP14.71□□□□□ -0.05
CHD3-205ENST00000449744 TEX19Q8NA77 164 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 LINC01555Q8NAE3 123 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 MCUQ8NE86 351 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 BIRC8Q96P09 236 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 NDC1Q9BTX1 674 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 MENTQ9BUN1 341 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 TSR3Q9UJK0 312 aaKnown RBP14.71□□□□□ -0.05
CHD3-205ENST00000449744 SRPK3Q9UPE1 567 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 KLHL20Q9Y2M5 609 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 NFS1Q9Y697 457 aa14.71□□□□□ -0.05
CHD3-205ENST00000449744 TLN1Q9Y490 2541 aaKnown RBP14.71□□□□□ -0.05
CHD3-205ENST00000449744 FAM237BA0A1B0GVD1 139 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 CTAGE9A4FU28 777 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 HCRTR1O43613 425 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 PHF2O75151 1096 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 CD63P08962 238 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 CBSLP0DN79 551 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 SPTBP11277 2137 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 PKMP14618 531 aaKnown RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 NR1D1P20393 614 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 CBSP35520 551 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 PTGIRP43119 386 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 CCL11P51671 97 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 ADARP55265 1226 aaKnown RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 DCDP81605 110 aaKnown RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 CHAF1BQ13112 559 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 ANKRD20A4Q4UJ75 823 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 ZC3H12BQ5HYM0 836 aaKnown RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 MLIPQ5VWP3 458 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 CILP2Q8IUL8 1156 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 LMNTD1Q8N9Z9 388 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 PROKR1Q8TCW9 393 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 ACTRT1Q8TDG2 376 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 COG1Q8WTW3 980 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 FAM136AQ96C01 138 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 SERPINB12Q96P63 405 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 DHRS4Q9BTZ2 278 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 TRIM55Q9BYV6 548 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 ING2Q9H160 280 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 EPN3Q9H201 632 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 CCDC68Q9H2F9 335 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 INTS10Q9NVR2 710 aaKnown RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 EURLQ9NYK6 297 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 IFT80Q9P2H3 777 aaPredicted RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 NDOR1Q9UHB4 597 aa14.7□□□□□ -0.06
CHD3-205ENST00000449744 G3BP2Q9UN86 482 aaKnown RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 RUVBL2Q9Y230 463 aaKnown RBP14.7□□□□□ -0.06
CHD3-205ENST00000449744 H3BMH7 237 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 FKBP9O95302 570 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 CAPN1P07384 714 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 ATP5DP30049 168 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 FNTAP49354 379 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 PPP1R7Q15435 360 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 ZNF385CQ66K41 422 aaPredicted RBP14.69□□□□□ -0.06
CHD3-205ENST00000449744 CPZQ66K79 652 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms