RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RBM22Q9NW64 420 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ATP6AP2A0A1C7CYW4 349 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 TCRBV5S2A0A599 114 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM25EA8MYX2 175 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 MT-CO1P00395 513 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 PRIM2P49643 509 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 BLVRAP53004 296 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 EFR3AQ14156 821 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 PLEKHG6Q3KR16 790 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 NECTIN4Q96NY8 510 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 UGT2B28Q9BY64 529 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 AMBRA1Q9C0C7 1298 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 TKTL2Q9H0I9 626 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 IFT22Q9H7X7 185 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 SMURF2Q9HAU4 748 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMCC3Q9ULS5 477 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 MAN2B2Q9Y2E5 1009 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 PNMA8CA0A1B0GUJ8 204 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 E5RI56 91 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 GSTA4O15217 222 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 MATN4O95460 622 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 CKBP12277 381 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZNF250P15622 560 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 YBX1P67809 324 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 GARNL3Q5VVW2 1013 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMEM199Q8N511 208 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 L3HYPDHQ96EM0 354 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 APOL4Q9BPW4 351 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 UBP1Q9NZI7 540 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 PMPCBO75439 489 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 CNTN5O94779 1100 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 IFNA16P05015 189 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 SBK3P0C264 359 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC2A3P11169 496 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC1A2P43004 574 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 ITKQ08881 620 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 CREB3L2Q70SY1 520 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZDHHC13Q8IUH4 622 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 NPWQ8N729 165 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 PRDM8Q9NQV8 689 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 ERVK13-1Q9NX77 482 aa13.17□□□□□ -0.3
SYNGAP1-204ENST00000449372 GRXCR2A6NFK2 248 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TARM1B6A8C7 271 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 H3BQ06 376 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 NOBOXO60393 691 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR2B3O76000 313 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 B3GAT3O94766 335 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 ISL1P61371 349 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TRIP4Q15650 581 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 RFX4Q33E94 735 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 VPS26BQ4G0F5 336 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 ARMC4Q5T2S8 1044 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 ANKS6Q68DC2 871 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 LHX8Q68G74 356 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMEM65Q6PI78 240 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 FUNDC1Q8IVP5 155 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMEM151AQ8N4L1 468 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 NETO2Q8NC67 525 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR4M2Q8NGB6 313 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 CNIH3Q8TBE1 160 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 POPDC3Q9HBV1 291 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 MRPL39Q9NYK5 338 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TBC1D24Q9ULP9 559 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 GREB1Q4ZG55 1949 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 GNGT2O14610 69 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 PI15O43692 258 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 AOC2O75106 756 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 FADS2O95864 444 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TYMPP19971 482 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC6A2P23975 617 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 SP3Q02447 781 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 GALEQ14376 348 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 HECTD2Q5U5R9 776 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 KLHDC8BQ8IXV7 354 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMCO6Q96DC7 493 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 MCCC2Q9HCC0 563 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 RAPGEFL1Q9UHV5 662 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 NYNRINQ9P2P1 1898 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 LOC110117498-PIK3R3F6TDL0 507 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 UGT2B10P36537 528 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 PGFP49763 221 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 HERVK_113P63132 956 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 NFKB2Q00653 900 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 PAN2Q504Q3 1202 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 ESRP1Q6NXG1 681 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 CNSTQ6PJW8 725 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 ERVK-6Q9BXR3 956 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 HDHD5Q9BXW7 423 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms